Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1104 ATGGATGGGCACACGGGGAAGGCGGCGGAGAAGGGGAAGGAAGAGGTCCGGTACCGGGGAGTGAGGAGGCGGCCATGGGGAAAGTACGCGGCGGAAATTAGGGACCCGTCGAGGCAAGGGGCGAGGCAGTGGCTTGGGACGTTTGATACGGCGGAAGAAGCAGCAAGAGCGTATGACAAAGCTGCCTTTAACATGAGAGGTCATCTCGCAATCCTTAATTTCCCCACCGAATACTATGCTCAAGTACGAGGATCCCCACCATATCCTCCCTATTTAGCTTCTTCTTCTCCACCTTCTTCGTCGTCATCGTCTTCTTTTCATGGCCATGCAAGTGGGAGCTCGTCGTCGTCGTCTGGTTCACTACGGAGGCAAGTTTTCGAGTTTGAGTGTTTGGATAATCAAGTGCTTGAAGACCTTCTTGAACCAGAAGACGAGAAGAAGAAAAGTGGTAGAGATTGA 459 0.5251 MDGHTGKAAEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFNMRGHLAILNFPTEYYAQVRGSPPYPPYLASSSPPSSSSSSSFHGHASGSSSSSSGSLRRQVFEFECLDNQVLEDLLEPEDEKKKSGRD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1104 152 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 FunFam Ethylene-responsive transcription factor 2 16 77 - -
Lele21g1104 152 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 MobiDBLite consensus disorder prediction 95 120 - -
Lele21g1104 152 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Lele21g1104 152 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 MobiDBLite consensus disorder prediction 1 21 - -
Lele21g1104 152 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Lele21g1104 152 MobiDBLite consensus disorder prediction 85 120 - -
Lele21g1104 152 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Lele21g1104 152 PANTHER DNA-BINDING DOMAIN 9 146 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1104 Lele-ChrLele21 8087055 8087513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1104 14 147 AP2-EREBP Transcription Factor Family AT3G23230 58.209 3.92e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g1104 AP2 6.8e-16 CL0081