Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1103 ATGGATAGAGCGAGCAAGGACGACGTGGAGGGCAGTGGCGGCGGAGGTGTCCGGTATCGGGGAGTGAGGAGGCGGCCTTGGGGGAAGTTTGCGGCGGAGATCCGGGACTCGACGAACCAAGGACAGAGGGTGTGGCTGGGGACTTTCGATACGGCAGAGGAAGCCGCCAGGGCGTACGACAGAGCTGCTTACGCCATGAGAGGCTCGTTCGCAATCCTTAACTTCCCAAATGAATACCCTCTAACAGCTAATCGTTCTAATAACGCTGCAACTTCATCATCTTCTTCATCAGCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGGAGCCGCCATCATGAAGTGTTCGAGTTCGAGTACTTGGATGATAGACTGTTGGAGGAGCTTCTGGACTGTGAGGAGAAAAGGAAGAAGGGAAAGTGA 423 0.5366 MDRASKDDVEGSGGGGVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYAMRGSFAILNFPNEYPLTANRSNNAATSSSSSSAPSSSSSSSSSRSRHHEVFEFEYLDDRLLEELLDCEEKRKKGK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1103 140 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Lele21g1103 140 CDD AP2 26 77 IPR001471 GO:0003700|GO:0006355
Lele21g1103 140 MobiDBLite consensus disorder prediction 81 109 - -
Lele21g1103 140 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Lele21g1103 140 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Lele21g1103 140 MobiDBLite consensus disorder prediction 81 113 - -
Lele21g1103 140 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Lele21g1103 140 MobiDBLite consensus disorder prediction 1 21 - -
Lele21g1103 140 PANTHER DNA-BINDING DOMAIN 18 134 IPR044808 GO:0003700|GO:0009873
Lele21g1103 140 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Lele21g1103 140 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Lele21g1103 140 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Lele21g1103 140 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1103 Lele-ChrLele21 8072226 8072648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1103 18 137 AP2-EREBP Transcription Factor Family AT3G23230 65.289 4.78e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g1103 AP2 6.7e-17 CL0081