Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1092 ATGATTGTGGACGCGGAGCAAGTTGGTGAAGAAGAAATGGCGACCCATGAGAGCAGAAGGAGGACGTGGCCTTTACATTGTGATTTCTTGCGTGCCCAGATGGAGAACTGGGAAAAGGAGCCACCTTTGACAACTTCCAGTGTTGGAAATTCATGCCCTCTGGAAAGCATAGGTGAGGATACAGTGATTGGGGACAAAAAACAGACATTGATGAAATTCGTCCCTGTTCTTCGGTCCGGTAAGTGGTCAGATATTGGAGAACGTCCTTATATGGAGGACACTCACATATGTATTGGAGACATGGCCAAGGAATTAGGGTATAAAGTTATCAGTGAGGAAGCAGTTTCCTTATATGGAGTATTTGATGGACATGGTGGTGAGAGTGCTGCGAAATTTGTGCGCGATTATCTACCAAGAGTGATTGTAGAAGATGCTGACTTTCCCTTGGAGATGGAGAAGGTAGTGACAAGGTCATTCTTTGAGACTGATGCTGCATTTGCAAAATCTTGTTCACTTGATTCTTCCATGTATTCTGGTACAACTGCACTAACCGCCATTATACATGGCCGGTCTTTGCTTGTAGCCAACGCTGGGGACTGCAGGGCGGTGTTGTCCCGATGTGGAGGGGCTATAGAAATGTCCAAAGATCACAGACCCTTATGTACCAAAGAAAGGAAGAGGATTGAATCCTTAGGTGGATTTGTTGATGATGGTTACCTGAATGGCCAACTCGGTGTCACGCGCGCTCTAGGTGACTGGCACCTCGAAGGAATGAAGGAAATAAGTGAAAGAGGACAACAAGGAGGCCCACTAAGTGCAGAGCCAGAACTAAAATTGATGACATTGACCAAAGAAGATGAGTTCTTGATAATTGGGAGTGATGGAATCTGGGATGTGTTCACAAGCCAAAATGCGATCGATTTCACTAGGAGGCGGCTTCGAAAGCACAACGATGTGAAACTTTGCTGCAAGGAAATGGTAGAGGAAGCAATAAAGAGAGGATCAACAGATAACTTAACTGTCGTGATGGTCTGTTTCCACTCAGATCCGCCGCCACCCATGGTGGTTGAAAGGTTAAGAGTCAGGAGAAGCATTTCAGCTGAGGGACTTCAGAATCTAAGATCTCTGTTAGAATCATAG 1140 0.4561 MIVDAEQVGEEEMATHESRRRTWPLHCDFLRAQMENWEKEPPLTTSSVGNSCPLESIGEDTVIGDKKQTLMKFVPVLRSGKWSDIGERPYMEDTHICIGDMAKELGYKVISEEAVSLYGVFDGHGGESAAKFVRDYLPRVIVEDADFPLEMEKVVTRSFFETDAAFAKSCSLDSSMYSGTTALTAIIHGRSLLVANAGDCRAVLSRCGGAIEMSKDHRPLCTKERKRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEISERGQQGGPLSAEPELKLMTLTKEDEFLIIGSDGIWDVFTSQNAIDFTRRRLRKHNDVKLCCKEMVEEAIKRGSTDNLTVVMVCFHSDPPPPMVVERLRVRRSISAEGLQNLRSLLES 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1092 379 FunFam Probable protein phosphatase 2C 22 63 349 - -
Lele21g1092 379 CDD PP2Cc 78 346 IPR001932 -
Lele21g1092 379 PANTHER PROTEIN PHOSPHATASE 2C 72 344 IPR015655 GO:0004722|GO:0006470
Lele21g1092 379 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Lele21g1092 379 Pfam Protein phosphatase 2C 90 338 IPR001932 -
Lele21g1092 379 Gene3D - 65 349 IPR036457 -
Lele21g1092 379 SMART PP2C_4 68 344 IPR001932 -
Lele21g1092 379 SMART PP2C_SIG_2 93 346 IPR001932 -
Lele21g1092 379 ProSiteProfiles PPM-type phosphatase domain profile. 78 346 IPR001932 -
Lele21g1092 379 SUPERFAMILY PP2C-like 69 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1092 Lele-ChrLele21 7945886 7949372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1092 72 378 PP2C-type Phosphatase Gene Family AT2G25620 59.935 9.85e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele21g1092 PP2C 1.2e-65 CL0238