Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1091 ATGGGTGGTACCAATAGTCGACACGTTTCTCGCCCTTCTTCTCGCCGAGTCAACCACTCCAACCGCTTCCGTCTTTCCTCTCTTCTTCCCTGCGGTGCCTCCACTTCTCGCGCTCCTCATGAGATTGAAGATCATCCAACTGAACTTCTAGTAGACTCTGCTACAGACTTAAATGATCAAGTTCAGAAAGTTACAGAGGAATCATCTTTATCACATTCGACAGAAGCTAGAATAAGCAGCTCACGTACTGAAACTGGAACCTCCTTTGGTAGCAGTATTCAATCCTGTGAGAATGCTAATCTTCAAGATTCTTCCAGAAGTGTTGCAACTAGCAATCAGAGGGAGTGCTTGTTTAAAAAAAGGGAGTTAGTTCCTCCTCATGAGGTAAGTACTAATCATAGTCATAATGAATTTTATAGGGATAGCAGCAACACAGCTAGTACTTCCTTTGTAGAACAGCAGTCTTCAGATCCAGTCTCTGTAAATAGTTCTGCTAACAAGGATGCAGTTAACAATATTGATAATTCAGTGGATAGTAGTATCCCCCGAATATCTCATGGAACATTGCAACTAAGGAGTTCATCCCCTCAAGTGTATGAAGACTCCAGTTCTCGTGGAAGTCATGTTGAGAGTCACGGCAGTGCAGCTACAGCTTTCCAGAATTCTGATTCAAATCCCAGTTCTCAAGTTTCAGATATTCCAGTAAATTCTCTGTTGCAAGAAAATGAATCTCATGAAGAAACAATGCCTCCAAGTTTGGGGTTTCATGTTCCCACCAGCGAAAGAGGACATGTGAATGAGAGTGGGCTTCATGTTGATGTGGTTACTACATCTGTCAATACTTTGTCTCATAGCAACTCTGATGCCATTGATCATAGTACCAGAAGAAATGGTAGGAGACAATTTTGGGATGCTTTTTCACATCGGAGTTCTAGAAGGTTTCGTATTTCTCCAACCATTGTCTTCTCAGCCGGTGATCCTGATGACCTAGCATCTCAAGACCGATGGCTTCTTGATTTGAGCAGTGGTTTCTCAAATGATGAAGTTGGAGAGGATTTTGAATATCTTGGCAGAAGAATCCGCAGATCTAATGCACGAATGCTGCGCTCAAGATCTCAGATCTGGGAAAGACTTCGTGATGGCCTTAATGAAACTGATCAGTGGACTAATTCTTGTCCACTAGGACTCCACCCTGATGGCAGGTGTTTCTGTGAGCCTTTCTCCTTGACTGAGGAATCTAATACCCGAGCAAGCATGTCCAGGATAGTCATGCTTGCAGAAGCTTTATTTGAGTTTTTAGATGAAATTCATCGCCAACCCTCACCATTTTCACTATCTGTGGCCTCTCTCCCAGCGCCGGAATCAGTTGTTGACTCTTTCCCTCTGAAGTGTCACAAAACGGTTGACACAGTTGATGGTGGTAATAATACTGAACAATGTCACATATGCCTAGTAGAGTACGAAGAAGGGGACAAAATCCGTGTTCTGCCTTGCAATCATGAGTTCCACATGGCATGCGTTGACAAGTGGCTTAAGGAAATACATGGTATATGTCCTCTCTGTCGTGGAAATGTTTGTGGAGAAGGGTTCACCGAGTCTTCAGCCTCATCAAACACAGAAGTATCACCCCACTGA 1635 0.4349 MGGTNSRHVSRPSSRRVNHSNRFRLSSLLPCGASTSRAPHEIEDHPTELLVDSATDLNDQVQKVTEESSLSHSTEARISSSRTETGTSFGSSIQSCENANLQDSSRSVATSNQRECLFKKRELVPPHEVSTNHSHNEFYRDSSNTASTSFVEQQSSDPVSVNSSANKDAVNNIDNSVDSSIPRISHGTLQLRSSSPQVYEDSSSRGSHVESHGSAATAFQNSDSNPSSQVSDIPVNSLLQENESHEETMPPSLGFHVPTSERGHVNESGLHVDVVTTSVNTLSHSNSDAIDHSTRRNGRRQFWDAFSHRSSRRFRISPTIVFSAGDPDDLASQDRWLLDLSSGFSNDEVGEDFEYLGRRIRRSNARMLRSRSQIWERLRDGLNETDQWTNSCPLGLHPDGRCFCEPFSLTEESNTRASMSRIVMLAEALFEFLDEIHRQPSPFSLSVASLPAPESVVDSFPLKCHKTVDTVDGGNNTEQCHICLVEYEEGDKIRVLPCNHEFHMACVDKWLKEIHGICPLCRGNVCGEGFTESSASSNTEVSPH 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1091 544 MobiDBLite consensus disorder prediction 127 232 - -
Lele21g1091 544 CDD mRING-H2-C3H2C2D_ZSWM2 479 522 - -
Lele21g1091 544 FunFam Putative RING zinc finger domain superfamily protein 447 527 - -
Lele21g1091 544 ProSiteProfiles Zinc finger RING-type profile. 480 522 IPR001841 -
Lele21g1091 544 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 538 - -
Lele21g1091 544 SUPERFAMILY RING/U-box 474 525 - -
Lele21g1091 544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 445 526 IPR013083 -
Lele21g1091 544 MobiDBLite consensus disorder prediction 64 93 - -
Lele21g1091 544 MobiDBLite consensus disorder prediction 129 232 - -
Lele21g1091 544 MobiDBLite consensus disorder prediction 1 25 - -
Lele21g1091 544 SMART ring_2 480 521 IPR001841 -
Lele21g1091 544 Pfam Ring finger domain 479 522 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1091 Lele-ChrLele21 7938394 7942342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1091 391 526 C3H Transcription Factor Family AT5G45290 52.980 1.48e-41 155