Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1071 ATGGCTTCCACTCAATGCTGCCTTCTCTTCTCTATTTTCCTTCATCTTCATTTTCACTCTTCAACTTCACAACGTTGGATCAAAGCTGGTTATATTTATATTGGCGGTGACTCCGTCTTTCCTGATATAAACTCTGCTTTGTTCACACACCTTATTTACGCCTTCGCTAGCGTCAATCCCTCCACTCACGAGATTTCCATACCCAAGTCTGATCAAGAATATTTCTCAATCTTCACCAGCATCGCCAAGCGCACGAACCCCTCCATCGTCACCCTTTTCTCTGTATGGAATGGACAGCCTGAAACTGCACAAGGTGTTTGGGGCAAGAAGGCGAACAATTCGGTCCTTTCTTCGATGCTCGGAAATGCTTCTTCTAGAAAATCTTTCATTCAGTCCTCAATACGAACAGCTAGACGACATGGGTTTCAGGGTATTGACTTGTTGTGGCTTTGGCCTCAAGAAGAATCAGATATGGCCAACTTGGGAATTCTGTTTCACGAATGGCGACTTGCTGTGGATTCTGAGAACAGAAGCTCTGGAGAATCGCCGTTGATATTGAGTATGGGTCTTCATTACACGCCCAATGTTTTTGAGAATTTGAGTTACCCTGTTGATTCTTTGGCGAAGAATTTGAACTGGGGTCATACTCTGTCTTATGATTATCATCTTCCTTCACTGGAAAATTTCACGCATCCTCATGCTGCTCTGTATGATCCTGTGAGCCATGTGAATACTGATTCTGGTATAAAGAAATGGTTGAGCAGAGGTTTTCCTTCTAACAAGCTGCTTCTGGGATTGCCTTACCATGGCTATGCTTGGGCATTGGATAGTCCCAAGCAAACTGCGATCGGTGCTCCATCATCGGGTCTGGCCATTACACAAGATGGGTCTTTGAGCTATTGGTATATCAAATGGTACGTTTGTTATGGGGCTTCCACGTTGTATAATGCTACCTATGTCGTGAATTATTGCACTATTGGTTCCGTTTGGATCAATTTTGATGATGTTGAAGCTATCAGAACTAAGGTTGCTTATGCAAAGGAAAAGAAACTGCTGGGTTACAATGTGTTTCATTTGATAAATGATAAGGATTGGATCCTTTCTAAGGCAGATATTCTTCATAAAGAAGCAACATTTTCTAATTTCAATGGATATGTGCCCCCTGAATATGTGAGAAAAGGTATATATTCAATGAAGTATGATGTCTTTAGTTTCGGAGTTCTTCTCTTGCAAATCATTAGTGGAAAAAGGACCTCATGTTACTATGGTGCATATGAAAATCTGAACCTTTTGGAATATGCATATGAGCTGTGGAGAGAAGGAAAAGGAATGGAGTTCATCGATCGGTCACTGGATGACACTGAATCAACTTGTAAAATCTTGAGATGCATGCAGGTAGCTTTGTTATGTGTCCAGGAGAATCCAAATGACAGACCTTCAATGTTAGAAGTTTATTCAGTTCTCAAGAATGAAGCCTCATCCATTAGTTCTCCTAAAAAACCTGCTTTTTCAGTAAACAGAGGTGAAGATGCGATAGAAACATGTCGGTGCAAGACTGAATTTTCTTCTATGAACGATCTAACAATCTCTCAGCTAGCAGCCAGATGA 1608 0.4129 MASTQCCLLFSIFLHLHFHSSTSQRWIKAGYIYIGGDSVFPDINSALFTHLIYAFASVNPSTHEISIPKSDQEYFSIFTSIAKRTNPSIVTLFSVWNGQPETAQGVWGKKANNSVLSSMLGNASSRKSFIQSSIRTARRHGFQGIDLLWLWPQEESDMANLGILFHEWRLAVDSENRSSGESPLILSMGLHYTPNVFENLSYPVDSLAKNLNWGHTLSYDYHLPSLENFTHPHAALYDPVSHVNTDSGIKKWLSRGFPSNKLLLGLPYHGYAWALDSPKQTAIGAPSSGLAITQDGSLSYWYIKWYVCYGASTLYNATYVVNYCTIGSVWINFDDVEAIRTKVAYAKEKKLLGYNVFHLINDKDWILSKADILHKEATFSNFNGYVPPEYVRKGIYSMKYDVFSFGVLLLQIISGKRTSCYYGAYENLNLLEYAYELWREGKGMEFIDRSLDDTESTCKILRCMQVALLCVQENPNDRPSMLEVYSVLKNEASSISSPKKPAFSVNRGEDAIETCRCKTEFSSMNDLTISQLAAR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1071 535 PANTHER CHITINASE 41 372 - -
Lele21g1071 535 SUPERFAMILY Chitinase insertion domain 269 333 IPR029070 -
Lele21g1071 535 Gene3D - 268 333 IPR029070 -
Lele21g1071 535 SUPERFAMILY (Trans)glycosidases 36 366 IPR017853 -
Lele21g1071 535 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 376 IPR001223 GO:0005975
Lele21g1071 535 SUPERFAMILY Protein kinase-like (PK-like) 384 505 IPR011009 -
Lele21g1071 535 CDD GH18_plant_chitinase_class_V 26 368 - -
Lele21g1071 535 Gene3D Transferase(Phosphotransferase) domain 1 366 505 - -
Lele21g1071 535 FunFam Chitotriosidase-1 268 333 - -
Lele21g1071 535 Pfam Protein tyrosine and serine/threonine kinase 385 487 IPR001245 GO:0004672|GO:0006468
Lele21g1071 535 Gene3D Glycosidases 42 363 - -
Lele21g1071 535 SMART 2g34 26 362 IPR011583 GO:0008061
Lele21g1071 535 Pfam Glycosyl hydrolases family 18 40 362 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1071 Lele-ChrLele21 7725859 7730170 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1071 1 378 Glycoside Hydrolase AT4G19810 40.420 2.16e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele21g1071 Glyco_hydro_18 1.6e-53 CL0058