Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1045 ATGAGTTTTCGGTTTTACTCTGATTATTTGAGATCGGAAACTTGTCAATTTTTAGAACTAACAAGGGATTTCACATGCCGGATATTGTATTTGGATCCTGTGCGCAACAAGCTACCTTTTCATCTTCAAACCTTTAACAAAATGTCAGGAGAAGAGGATGTAGCAGTACCTGCTGAGTCTTCAGCACCCCTGGGTGAGAGCATGGACATCATGACTGCCTTGCAGCTTGTGTTGAGGAAGTCTCTGGCTCATGGGGGTCTAGCAAGAGGACTCCATGAAGGAGCCAAGGTGATCGAAAAGCACGCTGCACATCTCTGTGTGCTTGCCGAGGACTGTGATCAGCCTGATTATGTTAAACTGGTCAAGGCACTTTGTGCTGATCATAATGTGAAATTGATGACTGTCGCCAGTGCTAAAACCCTTGGAGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGGAAAGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTGTGAAGGATTTTGGAGAGGAGTCACCGGCGTTAGATATTGTTCAGCAATACATAAAGGCTCAATAA 564 0.4504 MSFRFYSDYLRSETCQFLELTRDFTCRILYLDPVRNKLPFHLQTFNKMSGEEDVAVPAESSAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVASAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEESPALDIVQQYIKAQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1045 187 Gene3D - 52 187 IPR029064 -
Lele21g1045 187 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 73 166 IPR004038 -
Lele21g1045 187 PRINTS Ribosomal protein S12E family signature 157 170 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele21g1045 187 PRINTS Ribosomal protein S12E family signature 132 153 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele21g1045 187 PRINTS Ribosomal protein S12E family signature 77 90 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele21g1045 187 PRINTS Ribosomal protein S12E family signature 91 107 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele21g1045 187 ProSitePatterns Ribosomal protein S12e signature. 73 91 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele21g1045 187 FunFam 40S ribosomal protein S12 54 187 - -
Lele21g1045 187 SUPERFAMILY L30e-like 65 186 IPR029064 -
Lele21g1045 187 PANTHER 40S RIBOSOMAL PROTEIN S12 58 186 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1045 Lele-ChrLele21 7541486 7543055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1045 66 187 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 4.16e-64 192