Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1044 ATGCGTGGTTCATCTTCGCTCCTTATAAATACCCAAATGCTTCTCTCACTCCTTACTCACTCGCTTACCACACAACACTCTTCCAAATCTTCTTCATCTTCTTCGTCACTCACATCGATACGAACGAGACAGTTCCTTCGTTTTCTCTCTAAAATGGCTGGAAATGGAGTCTTCGCTGAGATTTTAGATGCAGATGTGTACAAGTATTACTCTGATGGCGAATGGAAGAAATCTTCTTCTTCCAAAACTGTTTCCATCATCAATCCTACCACTAGAAAGACTCAGTACAAAGTTCAGGCGTGCACACAAGAAGAGGTCAATAAAGTCATGGACTCGGCAAAATCTGCACAGAAATTATGGGCGAAGACTCCGCTGTGGAAACGAGCTGAACTCCTTCATAAGGCAGCTGCTATCCTCAAGGAGCACAAGGCTTCAATTGCAGAGAGCCTGGTGAAAGAAATAGCGAAGCCAGCCAAAGATGCTGTTACTGAGGTGGTAAGATCAGGGGATCTGGTTTCTTACTGTGCTGAAGAAGGCGTGAGGATTCTGGGAGAGGGAAAGTTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGGACAAAATATTGCCTGACATCCAAGATTCCATTGGGAGTGGTTTTAGCGATTCCACCATTTAACTACCCTGTCAACCTTGCTGTGTCAAAAATTGCTCCTGCGCTGATTGCTGGAAACTCCATTGTGCTGAAGCCTCCAACTCAGGGAGCTGTTTCTGCGCTACATATGGTGCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGTTGTGTTACTGGCAAAGGATCTGAGATTGGGGACTTCCTCACCATGCATCCAGGAGTTAACTGTATAAGCTTCACTGGAGGAGATACTGGGATTTCAATTTCAAAGAAAGCAGGCATGATTCCTCTTCAAATGGAGTTGGGAGGAAAAGATGCCTGTATAGTTCTTGAAGATGCTGACCTGGATTTGGTTGCTGCAAATATTATAAAAGGAGGTTTTTCTTACAGTGGTCAGAGGTGCACTGCTGTTAAGGTTGTCCTAGTGATGGAAACCATTGCTGATGCTCTGGTAGAGAAAGTGAAGGCAAAGGTGGCAAAACTGACTGTTGGGCCACCTGAGAATGACTGTGACATCACTCCGGTTGTGTCGGAATCATCAGCCAATTTCATTGAAGGTCTGGTTATGGATGCTAAGCAGAAAGGAGCAACATTTTGCCAGGAATACAGAAGAGAAGGGAACCTAATTTGGCCTTTGTTGCTGGATAATGTGAGGCAGGATATGAGAATAGCTTGGGAGGAGCCATTTGGCCCAGTTTTACCAGTTATTAGGATAAATTCTGTTGAAGAAGGAATCCACCATTGCAATGCTAGCAATTTTGGACTCCAGGGTTGTGTGTTCACAAAGGATGTGAACAAAGCAATTTCGATTAGTGATGCAATGGAGACAGGAACAGTTCAAATAAACTCCGCCCCAGCTCGTGGACCAGATCATTTTCCCTTCCAGGGTATCAAGGACAGTGGAATTGGATCCCAAGGCATTACCAACAGCATAAACATGATGACCAAAATAAAGACAACTGTTATCAATTTACCCTCCCCTTCTTATTCCATGGGTTGA 1644 0.4416 MRGSSSLLINTQMLLSLLTHSLTTQHSSKSSSSSSSLTSIRTRQFLRFLSKMAGNGVFAEILDADVYKYYSDGEWKKSSSSKTVSIINPTTRKTQYKVQACTQEEVNKVMDSAKSAQKLWAKTPLWKRAELLHKAAAILKEHKASIAESLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMETIADALVEKVKAKVAKLTVGPPENDCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRQDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDVNKAISISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTTVINLPSPSYSMG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1044 547 Pfam Aldehyde dehydrogenase family 75 534 IPR015590 GO:0016491
Lele21g1044 547 CDD ALDH_F11_NP-GAPDH 66 538 - -
Lele21g1044 547 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 318 508 - -
Lele21g1044 547 PANTHER ALDEHYDE DEHYDROGENASE 37 546 - -
Lele21g1044 547 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 73 331 - -
Lele21g1044 547 SUPERFAMILY ALDH-like 66 538 IPR016161 GO:0016491
Lele21g1044 547 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 342 353 IPR016160 GO:0016491
Lele21g1044 547 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 314 321 IPR029510 GO:0016491
Lele21g1044 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 318 508 IPR016163 GO:0016620
Lele21g1044 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 534 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1044 Lele-ChrLele21 7532182 7536166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1044 52 547 Aldehyde Dehydrogenase Gene Family AT2G24270 90.121 0.0 947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1044 21 7532182 7536166 Lele21g1044 21 7532182 7536166 ECH
Lele21g1044 21 7532182 7536166 Lele23g1003 23 15628696 15632545 hybridization