Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1040 ATGGGTGAGAAAGCGAAAGCTTCTTGCCATTCCGCGTTGCTTCACGGCAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTCGCCAAGGTCTACCATGCCAAGAACTTGCGGACCGGGAAAAGCGTGGCTCTGAAGGTGGTCGGCAAAGAGAAAGTGATTAAAGTGGGCATGATGGAGCAAATCAAGAGGGAGATTTCTGTGATGAAGATGGTGGAGCATCCCAACATCGTTGAGCTTTATGAGGTTATGGCGAGCAAATCCAAGATCTATATCGCTATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGCCTGAGGGAAGACGTCGCACGAGTCTATTTCCAGCAGTTGATCTCCGCCATCGATTTCTGCCACAGTCGCGGCGTTTACCACCGCGATCTCAAGCCGGAGAATCTGCTTCTCGACGAGGATGGGAATTTGAAGGTAACTGATTTTGGCCTGAGCACGTTTGCTGAGCACTTGCGGCAAGATGGGTTGCTTCACACCACTTGCGGTACTCCGGCGTACGTGGCGCCGGAGGTAATCGGTAGGAAAGGCTACGACGGTGCTAAGACCGATATCTGGTCTTGTGGGGTCATCCTGTATGTGCTTCTCGCCGGATTCTTGCCCTTCCAGGATGACAACTTGATGGCTATGTACCGAAAAATTTACAGGGGTGACTTCAAATGCCCGCCGTGGTTCTCCTCCGACGCTCGCCGGCTGATAACAAAGCTCCTCGACCCGAACCCGAATACCCGAATCACCATATCCGAAATAATGGACTCGCCCTGGTTCAAAAAATCCATTCCCAAGAGCATGGTGACACAGGAGGAACAGGAATTCGATTTTGATAGCGAGACATCAAAGCAGCAGCAAGAATCACCTGCGACAATGAACGCGTTTCACATAATATCATTATCGGAAGGGTTCGATTTGTCTCCATTGTTCGAAGAGAAGAAAAGGGAGGAGAAAGAGGAGCTGAGATTCGCGACAACGAGGCCGGCGAGCAGCGTTATATCGAAGCTAGAAGAGGTGGCGAAGGCGGAGAGGTTCAACGTGAAGAAGAGCGACACAAGAGTTAGGCTGCAGAGACAAGAATGCGGAAGAAAAGGGAAGCTGGCGATTGCGGCGGACATATACGCCGTGACGCCGTCATTTCTGGTGGTGGAGGTGAAGAAGGACAACGGTGATACATTAGAGTACAACCAATTCTGCAGCAAAGAGCTCCGCCCTGCGCTAAAAGACATCGTGTGGACTTCGCCGCCGGAAAGCTCCACGCCTGCTTGA 1308 0.5229 MGEKAKASCHSALLHGKYELGRLLGHGTFAKVYHAKNLRTGKSVALKVVGKEKVIKVGMMEQIKREISVMKMVEHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGRKGYDGAKTDIWSCGVILYVLLAGFLPFQDDNLMAMYRKIYRGDFKCPPWFSSDARRLITKLLDPNPNTRITISEIMDSPWFKKSIPKSMVTQEEQEFDFDSETSKQQQESPATMNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAERFNVKKSDTRVRLQRQECGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWTSPPESSTPA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1040 435 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Lele21g1040 435 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1040 435 SUPERFAMILY Protein kinase-like (PK-like) 15 295 IPR011009 -
Lele21g1040 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Lele21g1040 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 422 - -
Lele21g1040 435 CDD CIPK_C 306 421 - -
Lele21g1040 435 CDD STKc_SnRK3 17 271 - -
Lele21g1040 435 Gene3D Kinase associated domain 1, KA1 299 426 - -
Lele21g1040 435 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lele21g1040 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele21g1040 435 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1040 435 Pfam NAF domain 302 362 IPR004041 GO:0007165
Lele21g1040 435 FunFam Non-specific serine/threonine protein kinase 8 301 - -
Lele21g1040 435 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1040 435 Gene3D Transferase(Phosphotransferase) domain 1 100 278 - -
Lele21g1040 435 FunFam Non-specific serine/threonine protein kinase 300 425 - -
Lele21g1040 435 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1040 Lele-ChrLele21 7471410 7472717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1040 11 429 CBL-interacting serine-threonine protein kinases AT4G30960 76.815 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele21g1040 Pkinase 8.2e-76 CL0016