Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1037 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCTCCAGATGGGCTTCTTGAGATCTGTGAAAGAGTTTATGCTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAAGTATAAAGTCTACATGGATGGGATTATTGCTCAACTTCGAGAGCACTTCCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAACAGTCAGATGACTAACATATTGTCTGAGTATGACATGACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCGGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCACTTGGGCAGCATAATATTCTGTTGATGCACTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGCTAGCTGCCCTTTTGATTTTTCGAAAGCAATATAGTGGAGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATCTTTTGTCACCGTTAAATCCAATTCCTTCCCAACTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGAATGGCCTCCATTGGACAGGGCGCTCACGTTGGATTGCGTCATTCTCAGATGTTTCCCGGACTTTGATGGTGAAGGTGGATGTTGTCCAGTATTTCGAGTTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAGTCCTGTACTCAACAAAGAAGAACGACAAAACCGTCCGATTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGCCATATCCAAGGTGATGTTGTGATTGAAAGCATCAACTTGACCAGTGACCTGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACGGCTTTTATTAGGTCTAATATATTGATGCTTAACCTGGACGAAGTTGACACTTTATGGGATTCTAAAGATCAATTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATAGTACCTCATGGCTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAAGTTCAGGAGATCTTTAACCATGTAGACTGGTTGAATCCTAGGGCTGATGCGGCGCTAAATGTACTCCAACAACTTAGTGCTTCAGTGCATGATAAGTTGGATATAATTTCTGCTCAGCAGCATGATACAGGATCTTTGTTGCATGAAAAAGATCCTAAAGTGCCTCAGGGAAAAAAGAGTGAAGCAAAAAGGTTATTGCCCTTAAATTCTGAATGCCCGGTTAGTGGTTTGAGTAATGAAGTAGATGAGCCTATCAAGCCTGGTGCTTCTCCAAAACTATCTGAAAGCTCTGACATTATCTGTCAGAAGATGCCCATTGCGTCTATGAGAACCTCAGAATCCAGTAAACATGTTAAGAGTTCTGCAAAGCTTGATGTAAAAGCACAGGTGGATGATCTTGCCTTGTCTAGTTCTCTAGATACTTCTAGTGAACCCTTTTCACCAAACACACCTCCACAGAATCTGTCCTTGACTAGTAATTCTGAAAACGTTGGTTATACTCCACCCAACGCACAATTACTTTCTCATCTTTCCCCTCTAGGACCAGGTTATCCTGTTACTGGAGAAATTAAAGCCCAATCACAAGACAGAAGTGAGTCATCAAACTTTAGTTCAACATCTGGAACTTCATTATCAGGTACCTTTTCAAATAAGCTGCCTCTTGATTCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTCTGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCATTTCACAAGCTCCAACACCACCCACACCCCCAACTCCTCCTCAAAAGGAACATAAACTGGTTAGAGCTGTACCTCCTCCACCCCAACCTCCACCACTTCCGCAGAAAGAACAATCACTAGTTAGAGTCATGCCTCCTCCACCCCCACCAAAGGAGGAACCACATTGTCAACTTGGAGCCCCTCCTTCCCAACCACCTCCTCTAAAGGAGGAGCCGGAAGTTAAAACTGGACCACCACCACCACCTGCACCACCTCCCTTAAAGGTGGAGCCACCTGCTAGAGCTCAACCTCCTCCTCCACATCTTCCTGGGAAAGCTGATTCTACCACAGTATCACCAGCACCTCCTCCTCCTCCCCCTGTTGCAGCACTCTTGAAACACCCTAATCCTTCGTTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCATCACCTCCGGTTCCCTTTGGTAAAGGAGATGGAAATAGTGTGTTTAGTACTACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATAAGAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCAAAATCTTGTGAAGCTTCCAAACCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGTAGCAGCCCCAAGTTCAGGCGCCACCAAGAACATTGGCGCAAAAAGTTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTGATGGTAAGGCTTGCAAACTCTTATTGCTGCAAACAGATTGATAATGCTAACCCTGCAATATTTTTCATCAATTCAAACCATCATGAATTGATGAGTTCTAATTGGATATTTCTTTTGGTCAATTATGTCTTGTTTGGAATATTCCAGAGCTCAGTGCTAGCACTAGAGGAGTCGGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGCTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCAAAACTCAGAGTGTTTTCATTCAAGATTCAGTTCCTCTCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTGCTGTAGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTCAAATTGGATAGCCTTCTTAAACTCACTGAGACGCGAGCACGAAACAATAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGTCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAATCTCTGAAAATGATGGACCTATAACTGAGACATTCCGCAAGACTTTGAAAGATTTCCTCCGTTCTGCTGAAGCTGAAGTCCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATTGTTTATTTTGGTGAAGATCCGGCTCGCTGCCCTTTTGAGCAAGTTGTGACAACTTTGCTCAACTTCACGAGGATGTTCAACAAGGCGCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGAAAGCGAGAAAAAGACATGTGAATCACAAAGGATACTGCCGACCGCAATCCGGACCGGTAACGTCAAGTGA 3780 0.437 MTLLRKLFFRKPPDGLLEICERVYAFDCCFMTDAWNEEKYKVYMDGIIAQLREHFPDASILVFNFRQEETNSQMTNILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNILLMHCERGGWPVLAFMLAALLIFRKQYSGEQRTLDMVYRQAPRELLHLLSPLNPIPSQLRYLQYISRRNVAIEWPPLDRALTLDCVILRCFPDFDGEGGCCPVFRVYGQDPFLADKTPKVLYSTKKNDKTVRFYKQGECELIKIDINCHIQGDVVIESINLTSDLDHERMMFRVMFNTAFIRSNILMLNLDEVDTLWDSKDQFPKDFRAEILFSEMDAAAAVIADSTSWLEEKEGLPVEAFAKVQEIFNHVDWLNPRADAALNVLQQLSASVHDKLDIISAQQHDTGSLLHEKDPKVPQGKKSEAKRLLPLNSECPVSGLSNEVDEPIKPGASPKLSESSDIICQKMPIASMRTSESSKHVKSSAKLDVKAQVDDLALSSSLDTSSEPFSPNTPPQNLSLTSNSENVGYTPPNAQLLSHLSPLGPGYPVTGEIKAQSQDRSESSNFSSTSGTSLSGTFSNKLPLDSASHFSASSMTSTQPSPSPTTPLKEILPVRTRPASSISQAPTPPTPPTPPQKEHKLVRAVPPPPQPPPLPQKEQSLVRVMPPPPPPKEEPHCQLGAPPSQPPPLKEEPEVKTGPPPPPAPPPLKVEPPARAQPPPPHLPGKADSTTVSPAPPPPPPVAALLKHPNPSLQNSTSVPAAPNAPSPPVPFGKGDGNSVFSTTGPRGRILSRTISSTKNKNKKLKPLHWLKISRAVQGSLWHEAAKSCEASKPPEIDMSELESLFSVAAPSSGATKNIGAKSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMVRLANSYCCKQIDNANPAIFFINSNHHELMSSNWIFLLVNYVLFGIFQSSVLALEESALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFLSQVSDLRKSLNIVDAAVEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFKLDSLLKLTETRARNNKMTLMHYLCKVLSDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAISKGLEKVIQELSISENDGPITETFRKTLKDFLRSAEAEVRSLASLYSGVGRKVDALIVYFGEDPARCPFEQVVTTLLNFTRMFNKAHEENCKQLELEMKKSSESEKKTCESQRILPTAIRTGNVK 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1037 1259 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 555 606 - -
Lele21g1037 1259 Pfam Formin Homology 2 Domain 948 1217 IPR015425 -
Lele21g1037 1259 Pfam Formin Homology 2 Domain 798 902 IPR015425 -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 501 538 - -
Lele21g1037 1259 ProSiteProfiles Formin homology-2 (FH2) domain profile. 796 1243 IPR015425 -
Lele21g1037 1259 SUPERFAMILY Formin homology 2 domain (FH2 domain) 809 1234 - -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 501 802 - -
Lele21g1037 1259 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 625 747 - -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 778 799 - -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 408 461 - -
Lele21g1037 1259 Gene3D - 196 340 - -
Lele21g1037 1259 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Lele21g1037 1259 SMART it6_source 796 1259 IPR015425 -
Lele21g1037 1259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Lele21g1037 1259 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lele21g1037 1259 PANTHER FORMIN-J 1 690 - -
Lele21g1037 1259 Coils Coil 1218 1238 - -
Lele21g1037 1259 Gene3D Formin, FH2 domain 793 1228 IPR042201 -
Lele21g1037 1259 MobiDBLite consensus disorder prediction 408 424 - -
Lele21g1037 1259 SMART PTEN_C2_2 197 336 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1037 Lele-ChrLele21 7436176 7443936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1037 1 398 Protein tyrosine phosphatase (PTP) family AT5G58160 68.329 0.0 606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1037 21 7436176 7443936 Lele23g1011 23 15737088 15746533 hybridization
Lele21g1037 21 7436176 7443936 Lele24g1031 24 7628046 7636271 hybridization