Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1031 ATGACCAAGTATAACTTCTCATATAACAACTTAACCTTCTGTGATTCAACATTTACCTCTGAAATCCTAAAGAAGGCATTCTGTGGATCAGTTAACAGTTGCCCAATTGCTTTAAACCCCACAATTTTAAGAAAAAGAGGCACTGATCGAAATGGAATGAAGTTGGCTCTTGGATTGACTCTGGCAATGATCTGCCTTCTTGCTGGGCTTTTATTTCTAGCATGTGGCTGTAGAAGGAGCACAAAAATGTGGGCAGTGAAGCAAGCTTCATACAAAGAAGAACAGAACATCTCAGGACCCTTTGAATTTCAGACAGATTCAACTGCCTGGGTGGCTGATGTCAAGCAAGCAACTTTGGTCCGGGTAGTAATTTTCGAGAAGCCCTTGCCGAGCATCACATTCGCAGACCTCTTGTCTGCGACTTCGAACTTCGATAGAGGTACCCTTTTGGCTGAAGGGAAGTTCGGGCCTGTTTATAGAGGCTTTCTACCTGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTCTCTCTACATTGACAGATCAAGAGGCTGCGAGGGAGCTCGAGTATCTTGGTCGGATCAAGCATCCCAATCTTGTTCCTTTAACTGGTTATTGTCTAGCTGGAGATCAGAGGATTGCTATATATGAATACATGGAGAATGGGAACCTGCAAAACTTGCTCCATGACTTGCCACTTGGAGTGCATAGTCCAGAAGATTGGAGCACAGACACGTGGGAGGAAGATGACAATGGTGGCGGGATTCCAAAAGCCGGCTCTGAGGGATTACTCACATCTTGGAGATTCGTCACAAGATTGCCCTAG 828 0.4505 MTKYNFSYNNLTFCDSTFTSEILKKAFCGSVNSCPIALNPTILRKRGTDRNGMKLALGLTLAMICLLAGLLFLACGCRRSTKMWAVKQASYKEEQNISGPFEFQTDSTAWVADVKQATLVRVVIFEKPLPSITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVLSTLTDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSTDTWEEDDNGGGIPKAGSEGLLTSWRFVTRLP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1031 275 ProSiteProfiles Protein kinase domain profile. 144 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1031 275 Gene3D Phosphorylase Kinase; domain 1 102 219 - -
Lele21g1031 275 SUPERFAMILY Protein kinase-like (PK-like) 120 234 IPR011009 -
Lele21g1031 275 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 231 - -
Lele21g1031 275 FunFam Putative LRR receptor-like serine/threonine-protein kinase 105 219 - -
Lele21g1031 275 Pfam Protein tyrosine and serine/threonine kinase 148 231 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1031 Lele-ChrLele21 7389124 7389951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1031 55 244 Receptor kinase-like Gene Family AT4G39400 38.743 7.28e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele21g1031 PK_Tyr_Ser-Thr 3.7e-13 CL0016