Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1030 ATGGCTGATCGTGAGAGCTCCGGAGCTCTCATAGACGGGAATTCTGAACTGCGTGAATATAACGAATCAGCAGAAGAAGAAGAAGGAAAAGAAGGAAAGGGAGAGGAACTAAATCGAGTCTCTGAAGCATTGCCTAGCGAGTCGCAGCTAGGCGACTTTCAGAATTCTGAACCTTCCCGGGAAGCAGAGCCACCGGAGCGTAATTCGGAAGCCCTAGCTGTGCCCACTTCGCTTGAACCCCAAGAGAAAGATCAGAGTGCAGAATTGCAGGCGAGCTCTATTACGCAGGCGGCTGTTAAAGGCGAAAATAAGGAGCCAGTTAGACCTTCTGACATGGAACTTACTGAAAGAGAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACTTCAGTTATCGGTGTGTTCAAGTGCATTGTCAGAACTGTCACCAACATCTGTAACGCAATCTTTATCATCTGCTCCTAGTTCAGCTGTACCAGAACAAAGACAGTCTTCTCCAAAGGTTAATAATGCAATTGTGCTGCTGGAAGTAGACAAGGAAAAGCCTTCTCGCCATAATACCTTATCTACTGTTTCTGCTGTGAGGGCATCAACATCTGATGGATACAACTGGCGGAAGTATGGCCAGAAGCAAGTGAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAATGCTGTGACCATTCAGGCCATGTAGTAGAGGTTGTATATAAAAGTCAACACAGCCACGATCCACCACGGAAGACTAACTTCGGTAGAGAAAGTAAGTTTGCACCCTCCAAGCAGCCTAATGTGGAGAACCTTGTTCTAGAGAAGCCCATCAGAGTGCTTAATGATTCAAATCCTTGCCCTTCTTCAAAGGAACCTCCACAAGGAGCACCATGCAGTGCTGATAGGAAAAGACAAAACTCATCTGATCAAAGGGATAATGGTAAAGTTGACTTGAAGGATGATCATGTTATTGAGACAGAGCCCAAAAAAAGGCAAGTTGGTGACTATACATCCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGAGATGTGGGGATATCAGGTGATGGATATAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAACCCTCATCCTAGAAACTACTACAGATGCACTTCAGCTGGATGTCCCGTCCGTAAGCACATCGAGACTGCGGTAGATAACTCTAATGCAGTAATCATCACATACAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGTCCACCAAGTGCCCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACATGAGTTCAAGAAAACAGACAAACCGCAGAAGCAAAAATCCTCTACGCAGTGGTCGGTGGACACAGAGGGCGAATTAACCGGGGAAGCCTTGGAACTCGGGGGTGAGAAAGCAATGGAATCAGCTCGAACTCTCTTGAGCATTGGTTTCGAAATAAAGCCTTGCTGA 1539 0.4574 MADRESSGALIDGNSELREYNESAEEEEGKEGKGEELNRVSEALPSESQLGDFQNSEPSREAEPPERNSEALAVPTSLEPQEKDQSAELQASSITQAAVKGENKEPVRPSDMELTERESVQTTQTQIENQLQLSVCSSALSELSPTSVTQSLSSAPSSAVPEQRQSSPKVNNAIVLLEVDKEKPSRHNTLSTVSAVRASTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVVEVVYKSQHSHDPPRKTNFGRESKFAPSKQPNVENLVLEKPIRVLNDSNPCPSSKEPPQGAPCSADRKRQNSSDQRDNGKVDLKDDHVIETEPKKRQVGDYTSLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPVSMNNSHEFKKTDKPQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1030 512 MobiDBLite consensus disorder prediction 1 126 - -
Lele21g1030 512 Gene3D WRKY domain 357 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 Gene3D WRKY domain 186 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 MobiDBLite consensus disorder prediction 458 481 - -
Lele21g1030 512 MobiDBLite consensus disorder prediction 145 167 - -
Lele21g1030 512 MobiDBLite consensus disorder prediction 290 355 - -
Lele21g1030 512 MobiDBLite consensus disorder prediction 79 99 - -
Lele21g1030 512 FunFam WRKY transcription factor 357 433 - -
Lele21g1030 512 SUPERFAMILY WRKY DNA-binding domain 199 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 124 470 IPR044810 GO:0003700
Lele21g1030 512 Pfam WRKY DNA -binding domain 202 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 Pfam WRKY DNA -binding domain 374 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 SUPERFAMILY WRKY DNA-binding domain 368 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 MobiDBLite consensus disorder prediction 18 40 - -
Lele21g1030 512 ProSiteProfiles WRKY domain profile. 195 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 MobiDBLite consensus disorder prediction 314 344 - -
Lele21g1030 512 MobiDBLite consensus disorder prediction 42 56 - -
Lele21g1030 512 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 MobiDBLite consensus disorder prediction 251 278 - -
Lele21g1030 512 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g1030 512 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1030 Lele-ChrLele21 7379277 7386937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1030 25 512 WRKY Transcription Factor Family AT4G30935 47.758 2.73e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele21g1030 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1030 21 7379277 7386937 Lele21g1030 21 7379277 7386937 ECH
Lele21g1030 21 7379277 7386937 Lele23g1017 23 15806103 15813398 hybridization
Lele21g1030 21 7379277 7386937 Lele24g1023 24 7560780 7566663 hybridization