Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1026 ATGAAGGACAAGAGAGTGACTAACATTTATAGGTTGGATGACCTGGACTCTAGGCTCGCATCATCTTCTGATATTCGAGTTAAGAAAAGTGGATTTGGTATTGAGAAATTAAACCATGGTAGCCATGCAAGCACTGCAACCTCCAGGTCTTTCAAAAGAGAAATGATAAAAGGATCTGAAGGACTGAAGTCAATTGGACGATCACTTGGATTTGGGGTATCTAAGGCAGTATTCCCTGAAGATCTGAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTATTGAATAAACTTTTTGTTGTCTCGTGCATTTTGGCTGTGTCTATTGATCCATTATTTTTCTATCTCCCTGTCATTGATGATCCATCTAACTGCCTTGGTATAGATCGAAAAATGGCAATCGTTGTCACCACCTTGAGGACGGCTGTTGATGTTTTCTATCTTATGCACATGGCTCTTCAATTCCGCACTGCCTATATTGCCCCATCATCTCGTGTCTTTGGACGGGGGGAGCTTGTGATAGATTCAACACACATAGCCAAACGATACATGAGGCAGTATTTCATTGTTGACTTTCTATCTGTGCTGCCCATACCACAGATTGATACAGTGTTATACCTGTGCTTCTGGCAGCTTCCTGCTCTAGTTTGTGTCTACTTCATGGGTTGTTTTATGGGGATTCTACCTGCGGATACTGGGAGATATTTACCTCAACCAGATAAAGGAATTGTGGTTTGGAGATTTCTTCAAAGATCACAAGGCTCAGGAGTATTAGCGACAAAGCAGGCTTTGCTGTATATTATCTTACTACAGTATGTTCCTAGGTTTCTCCGGATGGTACCACTGGCTTCAGAACTTAAGAGAACAGCTGAAACTGCTTGGGCAGGTGCTGCATATTATTTGATGTTATACATGCTTGCCAGTCATATAGTTGGAGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTCATGCTGGCAAGAGGCATGTAGGAAAGGGTGCAAAAAGGATTTCTTGTATTGTGGTAACTGGTTTATGGAAGGTTATAATGACTGGAACAAAACAAGTGATCAAATTCTTAAGGCACATTGCTCTACAGAAGACGATTCGCCTTTTGATTTTGGAATTTTTGAACAAGCATTGTCATCCGGCATTATTTCATCTAAAAAATTTGTGTCCAAATACTGTTACTGTTTATGGTGGGGCCTCCAGAATTTGAGCACACTTGGCCAGGGGCTTCAAACCAGCACTTATCCTGGGGAAACCATCTTTTCAATAGCGCTAGCCATATTGGGTCTCATCCTCTTTGCACTTCTAATTGGTAACATGCAGACGTATCTTCAGTCTATTACAATAAGACTTGAGGAAATGAGAGTCAAAAGGCGTGACTCGGAACAGTGGATGCATCATCGTTTGCTCCCATCAGAGCTGAGAGAGCGGGTTAGACTCTATGATCAATATAAGTGGTTAGCGACACGTGGCGTCAATGAAGAAAGTTTGGTTCAGACACTTCCAAAGGATCTTAGAAGAGATATCAAGCGTCACCTTTGTCTGGCTTTAGTGAGAAGGGTTCCGCTGTTTGAGAGTATGGATGAGAGGCTGCTTGATGCCATTTGTGAAAGACTGAAACCTTGTTTATTTACTGAGAATACTTACATTGTACGGGAAGGAGATCCAGTTGACGAGATGCTTTTCATCATTCGTGGTCGACTCGAAAGTGTTACTACAGATGGTGGTAGAAGCGGCTTTTTTAACCGTGGTTTCCTTAAAGAGACCGACTTCTGTGGAGAGGAGCTTTTAACCTGGGCACTGGATCCTAAATCTGGTGCTAACCTCCCAGCTTCTACTCGTACGGTTAAGGCATTAACCGAGGTCGAGTGTTTCGCCTTGATCGCGGACGAGTTAAAATTCGTCGCCAGTCAGTTTAGGCGCCTTCATAGTAGACAGGTTCAACACACATTTCGGTTCTACTCACAGCAATGGAGGACTTGGGCCGCCTGCTTTATCCAAGCAGCATGGCGGCGATATTCGAAGAGGAAGGCCATGGAGCTTCGCCGGAAGGAAGAACCCGAGGAGTCAGAAGGAAGTCAAAGTAATGCTAGTGGTGGTTCATACAGCATTGGTGCCACCTTCTTAGCTTCAAGGTTTGCCGCCAATGCCCTCCGGGGAATACATCGCAATCGGAATGCTAAGACTGCGAGGGAGTTGGTGAAACTACAGAAACCTCCAGAACCTGACTTTACTGCTGAAGATGTAGATTAA 2280 0.4351 MKDKRVTNIYRLDDLDSRLASSSDIRVKKSGFGIEKLNHGSHASTATSRSFKREMIKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLLNKLFVVSCILAVSIDPLFFYLPVIDDPSNCLGIDRKMAIVVTTLRTAVDVFYLMHMALQFRTAYIAPSSRVFGRGELVIDSTHIAKRYMRQYFIVDFLSVLPIPQIDTVLYLCFWQLPALVCVYFMGCFMGILPADTGRYLPQPDKGIVVWRFLQRSQGSGVLATKQALLYIILLQYVPRFLRMVPLASELKRTAETAWAGAAYYLMLYMLASHIVGAFWYLLAVERNDSCWQEACRKGCKKDFLYCGNWFMEGYNDWNKTSDQILKAHCSTEDDSPFDFGIFEQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPGETIFSIALAILGLILFALLIGNMQTYLQSITIRLEEMRVKRRDSEQWMHHRLLPSELRERVRLYDQYKWLATRGVNEESLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKETDFCGEELLTWALDPKSGANLPASTRTVKALTEVECFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELRRKEEPEESEGSQSNASGGSYSIGATFLASRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTAEDVD 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1026 759 ProSiteProfiles IQ motif profile. 668 697 IPR000048 GO:0005515
Lele21g1026 759 SUPERFAMILY Voltage-gated potassium channels 92 454 - -
Lele21g1026 759 FunFam Cyclic nucleotide-gated ion channel 1 530 648 - -
Lele21g1026 759 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 753 - -
Lele21g1026 759 SUPERFAMILY cAMP-binding domain-like 461 651 IPR018490 -
Lele21g1026 759 Pfam Cyclic nucleotide-binding domain 553 642 IPR000595 -
Lele21g1026 759 ProSiteProfiles cAMP/cGMP binding motif profile. 532 636 IPR000595 -
Lele21g1026 759 Gene3D Helix hairpin bin 460 523 - -
Lele21g1026 759 FunFam Cyclic nucleotide-gated ion channel 1 459 523 - -
Lele21g1026 759 Gene3D Jelly Rolls 530 650 IPR014710 -
Lele21g1026 759 SMART cnmp_10 532 663 IPR000595 -
Lele21g1026 759 CDD CAP_ED 532 663 IPR000595 -
Lele21g1026 759 Gene3D - 102 457 - -
Lele21g1026 759 Pfam Ion transport protein 100 458 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1026 Lele-ChrLele21 7341720 7348467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1026 18 756 Ion Channels AT5G57940 72.193 0.0 1080