Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1017 ATGCAGCAAGGTGATCAAACGGTGATAAGCTTGAGGCCTGGTGGTGGTCGAGGCGGTGGCGGCGGAAGCAGGCTATTCGGTCCTCGATACGAGTCCTCGTCTTCCACATCTTCTTTCCCTGCTTTCGGATCCTTTTCTTCTGATCTCCCAGTCTTGCGCCCCCATGGCGGTGCTTCATCATCATTCTCGATTAAGGCTGGTGATTCACGGTTCGAAGGTCGTGAGCGGGTGCGATACACCAGAGATCAACTGTTACAGCTTAGAGAGGCTGTTGAGGTCCCTGATGATATTATAAAAATCAAACAAGATATAGAAGCTGAGCTTTTTGGCGAAGATCAAAGCTGGGTTCATGCGGAAAGCAATCCCCCACATCAATTTCAAAATCGATATTCTGAGCTAGATAACCGTGACTGGCGTGGCCGGTCTGGACAACTTTCTCCTGCTGAAGAAAGATCTTGGAACAATATAAGGGAAAATAGAGAATTTGGCAATCGATTTGACTCAAGACAGCCAGATGCCAGCCAGATTAATCGCCAAGACCAACAGGGTTTGCAGTTTGCTAAGGGAGGACCTGCTCCTACTCTAGTGAAGGCTGAAGTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCTGAGAAGGATCGTGTGTTGAAGACAGTGAAAGGGATTCTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAATTGATTGATTCTGGCATTACATCAGCTGAAATCTTGAGGGATGTCATTTCGCTTATATTTGAAAAGGCGGTGATTGAACCAACATTTTGCCCCATGTATGCTCTTCTGTGTTATGATCTTAATGAGAAGTTGCCACCATTCCCTTCTGAAGAACATGATGGCAAAGAGATCACTTTTAAGAGAGTGCTCTTAAATCACTGCCAGGAGGCCTTTGAAGGTGCTGATAAATTGAGGGAAGAAGTTAGGCGGATGACTGCCCCTGAACAGGAGATGGAGCGCCGTGAGAAGGAAAGACTGGCCAAGCTTCGTACTTTGGGAAACATTCGATTAATTGGAGAGCTCTTAAAGCAGAAGATGGTTCCTGAAAAAATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCACCTGATACCAAGGCCTGCCCTGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGCAAGCAACTTGGTGAAAGCCCAAAATCACGGCGTATAAATGATGTGTACTTTAGCCGATTGAAAGAATTGAGTGCTAATCCTCAACTTGTACTGCGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTGCGTATGAATAACTGGGTTCCAAGGCGTGAAGAGATAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAAAATCTTGGATTGCGCCCAGGTGCCACTGCAAACATTAGAAATCCCCATAATGTGCAAGGAAACGCCACTCCTGGAGGATTCCCCATTGCTCGACCTGGTACTGGTGGAATGATGCCTGGAATGCCAGGGACCAGGAAGGTGCCTGGGATGCCTGGAATTGATAATGACAATTGGGAGATCCCTAGGAATCGGTCAATGCCAAGAGAGATGTCAGCTGGGCAACCAACTGCACAGGGCCAGACTCTTATTTACAAGACAGCAGCCGTGAGTTCAAAGTTGCTACCTCAAGGCACTGGTGGTTTTATAAGTGGAAGAAGTAGTGCCCTAGTTCATGGAGGTGGTGGCGGCGGCGCTCCTCCCACAATTCCATCAAACTTTGGTTCAGATGCTGAAGCTCCACCTGTTAAAGTTGCTCCTGCCATCTCCTCTGAGAAGCCCCTGTCTCCTGCACCAAAAATAAGCACCGATGATCTTCGGCGCAAAACCCGGTTTCTTCTAGAAGAATATTTTAGTGTTGGGCTCTTGGATGAGGCATTACAGTGTGTGGAGGAACTAGAATCTCCAGCTTACCACCCTGAGGTTGTCAAGGAAGCCATTTCCTTGGCACTAGATAAAAGCCCACCATGCGTTGAACCTGTTGGCAATCTTCTGGAGTATCTCCTCAATAAAAGGATTCTGACGGCAAGAGACATAGGCACTGGGTCTTTGTTATTTGCTTTCATGCTCGACGATATTGGCATAGATTTACCAAAAGCTCCGAACAACTTTGGTGAGATAATTGGGAAACTGATTTTAGCTGGGGGATTGGATTTTAAGGTGGCACACGAGATTCTTAAGAAGGTGGAAGATGACCTGTTCCAGAAAGCCATATTCAATGCTGTGTTACAGGTCATTGCTTCATCATCTGGGCAAGCTGTTTTGGAGTCACAAGCATCTGATGTCGAAGCCTGCCGGAGTCTGTTGAAGTGA 2361 0.4625 MQQGDQTVISLRPGGGRGGGGGSRLFGPRYESSSSTSSFPAFGSFSSDLPVLRPHGGASSSFSIKAGDSRFEGRERVRYTRDQLLQLREAVEVPDDIIKIKQDIEAELFGEDQSWVHAESNPPHQFQNRYSELDNRDWRGRSGQLSPAEERSWNNIRENREFGNRFDSRQPDASQINRQDQQGLQFAKGGPAPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSAEILRDVISLIFEKAVIEPTFCPMYALLCYDLNEKLPPFPSEEHDGKEITFKRVLLNHCQEAFEGADKLREEVRRMTAPEQEMERREKERLAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDTKACPVEENVEAICQFFNTIGKQLGESPKSRRINDVYFSRLKELSANPQLVLRLRFMIRDVLDLRMNNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANIRNPHNVQGNATPGGFPIARPGTGGMMPGMPGTRKVPGMPGIDNDNWEIPRNRSMPREMSAGQPTAQGQTLIYKTAAVSSKLLPQGTGGFISGRSSALVHGGGGGGAPPTIPSNFGSDAEAPPVKVAPAISSEKPLSPAPKISTDDLRRKTRFLLEEYFSVGLLDEALQCVEELESPAYHPEVVKEAISLALDKSPPCVEPVGNLLEYLLNKRILTARDIGTGSLLFAFMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVAHEILKKVEDDLFQKAIFNAVLQVIASSSGQAVLESQASDVEACRSLLK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1017 786 MobiDBLite consensus disorder prediction 153 167 - -
Lele21g1017 786 Gene3D - 207 443 - -
Lele21g1017 786 MobiDBLite consensus disorder prediction 168 184 - -
Lele21g1017 786 Gene3D - 614 781 - -
Lele21g1017 786 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 66 770 IPR045208 GO:0003743
Lele21g1017 786 SMART if4_15 216 442 IPR003890 GO:0003723|GO:0005515
Lele21g1017 786 MobiDBLite consensus disorder prediction 140 191 - -
Lele21g1017 786 Pfam MA3 domain 622 734 IPR003891 -
Lele21g1017 786 ProSiteProfiles MI domain profile. 621 743 IPR003891 -
Lele21g1017 786 FunFam Eukaryotic translation initiation factor isoform 4G-2 207 443 - -
Lele21g1017 786 SMART ma3_7 622 734 IPR003891 -
Lele21g1017 786 Pfam MIF4G domain 216 442 IPR003890 GO:0003723|GO:0005515
Lele21g1017 786 MobiDBLite consensus disorder prediction 1 39 - -
Lele21g1017 786 SUPERFAMILY ARM repeat 210 445 IPR016024 -
Lele21g1017 786 SUPERFAMILY ARM repeat 615 773 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1017 Lele-ChrLele21 7238677 7244065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1017 1 784 Eukaryotic Initiation Factors Gene Family AT5G57870 62.250 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1017 21 7238677 7244065 Lele21g1017 21 7238677 7244065 ECH
Lele21g1017 21 7238677 7244065 Lele23g1034 23 15952281 15958132 hybridization
Lele21g1017 21 7238677 7244065 Lele24g1008 24 7407483 7412874 hybridization