Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1015 ATGACAACGAAGGTGGTCCTTGGAGAAGTCACAGGAGGGCGGCGAGGTACAGCGGTTAGAAAGAAACAAAGGAAAGACAAAGCTTCAATTGAAGGCAATGGGGACACTGTAACCAACCCAATCAACCCTAACGTGGACACATTAGGTGACCTCACCATAACCATTTCCTTCTTATTAACCTCTTCTTCCTCACTCCCTCCATACTCATTCCTCATCCATCACTCTCGCCCGCCCGCCATGGAAGCCAGCGCTGGACTCGTTGCTGGGTCTCACAACCGCAACGAGCTCGTCGTCATTCACGGCCATGAAGAGCCGAAACCTTTGAAGAATTTGGATGGCCAGGTCTGTGAGATATGTGGCGACGATGTCGGACTCACCGTCGACGGCGACCTGTTTGTCGCCTGCAATGAGTGTGGTTTCCCGGTTTGCCGTCCCTGTTATGAATATGAACGAAGAGAAGGAAGCCAACTCTGCCCACAATGCAAGACCAGATACAAGCGTCTCAAAGGAAGCCCGAGGGTGGAGGGAGACGAAGATGAGGAGGACGTGGATGACATTGAACATGAATTCAAAATCGCAGCAGACGACAAGAACAAGGATAACCATATGGCAGAGGCCATGCTGCATGGCAAGATGACCTATGGAAGAGGCCCTGAAGATGACGACAATGTTCAATTCCCTCCCGTCATTGCCGGAAACCGCTCCCGTCCGGTGAGTGGAGAATTCCCAATAACATCCCATGCTTATGGTGGAGACCAGATGCTATCCTCTTCTCTGCACAAACGCGTTCATCCTTATCCAGTTTCTGAGCCTGGAAGTGTGAGAGGGGACGAGAAGAATGAGGATGGGTGGAAAGATAGAATGGATGACTGGAAACTGCAGCAAGGAAACCTAGGGCCTGAACCTGATGAAGATCTAGAGGCAGCTTTGTTGGATGAAGCGAGGCAGCCATTGTCGAGGAAAGTGCCAATAGCATCGAGCAAGATTAATCCGTATAGAATGGTGATAGTGGCACGTCTGGTGATTCTTGCATTCTTCCTGAGATATAGAATTATGAACCCGGTTCATGATGCCATAGGGCTGTGGCTCACCTCCATTATATGTGAAATCTGGTTTGCTTTCTCTTGGATCCTTGATCAGTTCCCTAAATGGTTCCCCATTGATCGTGAGACCTACCTTGATCGTCTTTCCTTCAGGTATGAAAGAGAAGGAGAGCCAAATATGCTGGCATCGGTGGATGTGTTTGTGAGTACGGTGGATCCGATGAAGGAACCACCGTTGGTGACGTCGAACACGATTCTGTCGATATTGGCTATGGATTATCCGGTGGATAAGATATCATGTTACATATCAGACGATGGAGCTTCCATGTGCACGTTCGAAGCACTTTCAGAAACAGCAGAATTTGCAAGGAAGTGGGTTCCATTTTGTAAGAAATTCAGCATTGAGCCTCGAGCTCCTGAGATGTACTTCTCTGAGAAGATGGATTACTTGAAAGATAAGGTTCAGCCCACTTTCGTCAAGGAGCGTCGAGCCATGAAGAGAGAATACGAAGAGTTCAAGGTGAGAGTGAATGCACTTGTGGCGAAAGCCCAGAAGGTTCCAGCAGGAGGATGGATTATGCAGGATGGCACTCCATGGCCAGGCAACAACACCAAGGACCATCCTGGTATGATCCAAGTCTTTCTCGGTCACAGTGGCGGCTGCGACACCGACGGCAATCTTCTTCCCCGTCTCGTTTATGTCTCCAGAGAGAAACGCCCTGGTTTCGCCCACCACAAGAAAGCTGGCGCCATGAATGCTCTTGTTCGCGTCTCTGCTGTTCTCACAAATGCACCTTTCATGCTCAACTTGGATTGTGATCACTACCTTAATAACAGCAAGGCCGTCAGAGAGGCCATGTGCTTCTTGATGGATCCCCAAACTGGGAAAAAAGTCTGCTATGTCCAATTCCCTCAGAGATTCGATGGCATTGACAGGCACGATCGTTACGCCAACAGGAACACCGTCTTCTTCGACATTAACATGAAGGGTCTAGATGGTATTCAAGGTCCTGTGTATGTGGGGACTGGGTGTGTGTTTAGGAGGCAAGCTCTGTACGGATACAATCCTCCGAAGGGTCCTAAACGCCCCAAGATGGTAAGCTGTGATTGCTGCCCGTGTTTCGGACGCCGCAAGAAGCAAAAGCATGAGAAAGATGGTACAAATGCAGAGTCTGCAATGCTGCAACAAGGAATGGACGATGATAAAGAGTTGCTCATGTCTCAGATGAATTTCGAAAAGAAATTTGGGCAATCATCTATCTTTGTGACTTCAACTTTGATGGAAGAAGGTGGTGTGCCTCCTTCCTCAAGCCCAGCAGCTCTTCTCAAAGAGGCCATTCATGTCATAAGCTGTGGCTATGAGGATAAAACCGAATGGGGAACTGAGCTGGGTTGGATCTATGGATCTATTACTGAGGATATCCTAACAGGTTTCAAGATGCATTGCCGTGGATGGAGATCTATTTACTGTATGCCAAAGATACCTGCATTCAAGGGTACAGCTCCAATCAACTTGTCAGATCGGCTCAACCAGGTACTTCGTTGGGCTCTTGGTTCGATTGAGATCTTCTTCAGTCCCCATTGCCCTGCATGGTATGGCTACAAGGGTGGCAACAAGCTCAAGTGGCTCGAGCGATTCGCCTATGTCAACACCACCGTCTACCCCTTCACCTCCCTCCCTCTACTTGCCTACTGTATTCTTCCTGCTATTTGCTTGCTCACTGACAAGTTCATCATGCCACCGATAAGCACTTTTGCTGGTTTGTACTTCGTTGCTTTGTTCTCTTCCATCATCGCGACGGGCCTGCTTGAGTTGAAATGGAGTGGAGTAAGCATAGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATAGGTGGTGTATCAGCACATCTATTTGCTGTCATACAAGGTCTTCTGAAGGTGCTAGCCGGGATCGACACAAACTTCACCGTTACATCGAAGGCAGCAGATGATGAGGAATTTGGAGAATTATACACATTCAAATGGACCACTCTCCTAATCCCACCAACCACTATACTAATCATCAATATTGTTGGTGTTGTTGCTGGAATCTCAGATGCAATTAACAATGGCTACCAATCTTGGGGACCCCTATTTGGAAAGCTCTTCTTTTCCTTCTGGGTCATTGTTCATCTCTACCCATTCCTTAAAGGTTTGATGGGAAGACAAAACAGAACACCCACCATTGTTGTGATTTGGTCAGTGCTTTTGGCTTCTATTTTCTCTCTACTTTGGGTGAGAATTGACCCATTTGTGATGAAAACTAAGGGGCCTGATACCAAGATGTGTGGAATCAACTGCTGA 3369 0.4785 MTTKVVLGEVTGGRRGTAVRKKQRKDKASIEGNGDTVTNPINPNVDTLGDLTITISFLLTSSSSLPPYSFLIHHSRPPAMEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFKIAADDKNKDNHMAEAMLHGKMTYGRGPEDDDNVQFPPVIAGNRSRPVSGEFPITSHAYGGDQMLSSSLHKRVHPYPVSEPGSVRGDEKNEDGWKDRMDDWKLQQGNLGPEPDEDLEAALLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRIMNPVHDAIGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSFRYEREGEPNMLASVDVFVSTVDPMKEPPLVTSNTILSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKMDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGCDTDGNLLPRLVYVSREKRPGFAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYLNNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKQKHEKDGTNAESAMLQQGMDDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKIPAFKGTAPINLSDRLNQVLRWALGSIEIFFSPHCPAWYGYKGGNKLKWLERFAYVNTTVYPFTSLPLLAYCILPAICLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKMCGINC 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1015 1122 CDD mRING-HC-C4C4_CesA_plant 114 164 - -
Lele21g1015 1122 SUPERFAMILY Nucleotide-diphospho-sugar transferases 426 902 IPR029044 -
Lele21g1015 1122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 189 IPR013083 -
Lele21g1015 1122 FunFam Cellulose synthase 98 189 - -
Lele21g1015 1122 Pfam Zinc-binding RING-finger 106 183 IPR027934 -
Lele21g1015 1122 FunFam Cellulose synthase 529 703 - -
Lele21g1015 1122 Pfam Cellulose synthase 412 1116 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele21g1015 1122 SUPERFAMILY RING/U-box 100 184 - -
Lele21g1015 1122 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 573 703 IPR029044 -
Lele21g1015 1122 ProSiteProfiles Zinc finger RING-type profile. 116 162 IPR001841 -
Lele21g1015 1122 Coils Coil 510 530 - -
Lele21g1015 1122 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 315 1089 - -
Lele21g1015 1122 MobiDBLite consensus disorder prediction 13 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1015 Lele-ChrLele21 7219957 7226165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1015 80 1122 Cell Wall Biosynthesis AT5G17420 85.057 0.0 1824