Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1014 ATGTGTATCAATGACATGTTAGGCTCAAAATTTGCCCCAAGGATTGGGAAAAGAACAGCTATAAATGTCAACCCCAACCTCAGTCATCCATACTTGCTCTGCCCTCCTCATTCACCACCACCCACCATGGAAGCTAGCACTGGACTTTTTGCAGGGTCTCACAACAACAACGAGCTTGTAGTCATACAAGGACATGAAGAAGAGCATAAGCCAGTGAAGAACTTAGATGGTCAGCTATGTGAGATATGTGGTGATTCTGTGGGGTATACAGTGGATGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTGTGCAGACCATGTTATGAGTATGAAAGGAGGGAAGGGACTCAAGTTTGCCCTCAGTGCCAGACCAGATACAAGCGAATCAAAGGAAGCCCAAGAGTTGAGGGAGATGAAGATGAAGATGACGGGGATGATATTGAGCATGAGTTTAAAATGGAAGAAGAAAAGTATAAGCTCATGATAGGCCGTGAAGAAGATGACGATAATGCTAAATTACCAGTAGTAATAGCCAAGGTTAGTCTTATACAGTCTACGCTTGATACAAGGAAATTACAGGTGAATGGAGAGATGCCCATTATTCGAGAACCTGGAAATGGAAAGTTGGATGAAAAGACAGAGATAACAGATGACTGGAAGATGAATCAAGGCAATCTGTGGCCTGAAACTGATGCATCAGTTGACCCTGAAAAGGCCATGAGAGACGAAGCTAGACAACCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTCACAGCTCGGCTTATGATTCTACTATTGTTCCTTCAGTACAGAGTCCTACACCCAGTTCCTGATGCGGTTGGACTCTGGCTAACATCTGTAATATGTGAAATATGGCTTACATTGTCGTGGATAATTGATCAGATTCCGAAATGGTTTCCCATTGACCGGGAGACATACCTTGATCGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTCCCCCAATAGATGTCTTTGTCACTACTGTCGATCCAATTAAGGAACCTCCACTAGTTACAGCTAATACTGTTCTTTCAATCTTGGCCATGGATTACCCTGCTCGTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTCACCTTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTACCCTTCTGCAAAAAATATACCATAGAGCCCCGAGCCCCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCGACTTATGTCAGAGACCGCCGTACTATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATGCACTTGTAGCTAAATCCATAAGAGTTCCCCAAGAAGGGTGGACTATGCAAGATGGAACACCATGGCCAGGAAACAATACCAATGATCACCCTGGTATGATACAAATTCTTCTTGCTCGTAGTGGAGGCGTTCAAGGAAATGAACTTCCCTGTCTTGTCTACCTGTCTCGTGAGAAAAGGCCAGGGTTTCAACACCACAGCAAAGCTGGAGCTTTGAATGCATTGCTTCGGGTATCTGCATTGCTAAGCAATGCTTCTTTTGTGCTGAACTTGGATTGCAATCACTATGTGAACAATAGCAAGGGTGTGAGAGAGGCCATGTGTTTCTTCATGGACCTACAAGTTGGAAAGACCATTTCCTTTGTCCAGTTCCCGCTAAGATTTGACAGCCTTGATAAGCATGATCGTTATGCCAACAGAAATACTGTTTTATTTGATATAAACTTGAGGTGCCTAGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGTATCTTCCGGAGGAAAGCTTTAAATGGCAGTGAACCTCCGAAGACTTCAAAGCGCCCAAAAATGGTAGGTTGTGGCTGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGATTCAACCATGACAGGAACAGATGAAGACAAGCAGATTTTAGCATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTGAACTCTTCCATAATAGAAGAAGGTGGTACTCCTTCTACCTCCAATCAGGCAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGTAGCAGATATGAAGACAGAACACTATGGGGATACGAGGTTGGTTGGAACTATGGATCTATATCATCAGATATTCTGACAAGTTTCAAAATGCACTCACTTGGTTGGAGATCTGTGTACTGCATGCCAGAAAGACCTGCTTTTAGGGGTACTGCTCCGATCAACCTTTCAGATCGACTCAGTCAGGTGCTTAGATGGGCAGTTGGATCACTTGAGATCCTTTTCAGCAGCCATTGCCCAATATGGTACACCTTAGGTGAAGGCAAACTTAAGGGGCTTCAAAGAATTGCCTATATCAACAGCACAGTCTACCCTTTCAGCTCAATACCCCTTCTAGTATATTGTCTCATTCCTACCGTCTGCCTGCTCACAGACAAGTTCATCACACCATCGATAAGCACCTTGGCAAGTCTTCTCTTTATTGCACTGTTCATCAGTGTCTTTGCATCTAGCATTCTTGAGTTGAGATGGAGTGGAGTCACTCTCGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATTGGTAGCGTCTCAACACACCTCTTTGCAATTGTGAGAAACTTTCTGAAATCTGTGTCCAAAGTTGATATTAATTTCAGCGTCGTGTCAAAAGTACCAGATGATGGGGAATTCCAAGATCTGTACACCTTTAGATGGACAGCACTACTGATACCTCCAACCACTATCATCATCATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCCATAAACAGTGGTGGACATTCTTGGGGAGCATTACTTGGGAAACTCTTCTTCTCTTTCTGGGTTCTGGTCCACCTTTACCCATTCCTCAAAGGTATGATGGGTAAACAGAACCGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAAAAGGACCTGATGTTAAGCAGTGTGGAATCAGTTGCTGA 3162 0.4336 MCINDMLGSKFAPRIGKRTAINVNPNLSHPYLLCPPHSPPPTMEASTGLFAGSHNNNELVVIQGHEEEHKPVKNLDGQLCEICGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDGDDIEHEFKMEEEKYKLMIGREEDDDNAKLPVVIAKVSLIQSTLDTRKLQVNGEMPIIREPGNGKLDEKTEITDDWKMNQGNLWPETDASVDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVTARLMILLLFLQYRVLHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPARKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYTIEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKSIRVPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGVQGNELPCLVYLSREKRPGFQHHSKAGALNALLRVSALLSNASFVLNLDCNHYVNNSKGVREAMCFFMDLQVGKTISFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSEPPKTSKRPKMVGCGCCPCFGSRKKLQVHSKHDDGNEDDSTMTGTDEDKQILASEMNFENKFGKSAVFVNSSIIEEGGTPSTSNQAALLKEAIHVMSSRYEDRTLWGYEVGWNYGSISSDILTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLEILFSSHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLLVYCLIPTVCLLTDKFITPSISTLASLLFIALFISVFASSILELRWSGVTLEEWWRNEQFWVIGSVSTHLFAIVRNFLKSVSKVDINFSVVSKVPDDGEFQDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1014 1053 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 334 436 IPR029044 -
Lele21g1014 1053 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 482 634 IPR029044 -
Lele21g1014 1053 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 248 1020 - -
Lele21g1014 1053 CDD mRING-HC-C4C4_CesA_plant 78 128 - -
Lele21g1014 1053 Pfam Zinc-binding RING-finger 70 146 IPR027934 -
Lele21g1014 1053 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 153 IPR013083 -
Lele21g1014 1053 ProSiteProfiles Zinc finger RING-type profile. 80 126 IPR001841 -
Lele21g1014 1053 Pfam Cellulose synthase 345 1047 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele21g1014 1053 SUPERFAMILY Nucleotide-diphospho-sugar transferases 357 872 IPR029044 -
Lele21g1014 1053 Coils Coil 443 463 - -
Lele21g1014 1053 FunFam Cellulose synthase 62 153 - -
Lele21g1014 1053 SUPERFAMILY RING/U-box 64 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1014 Lele-ChrLele21 7213413 7219748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1014 43 1053 Cell Wall Biosynthesis AT5G17420 66.699 0.0 1435