Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1008 ATGATTGTCAAGAAGAGGGACTTCTTAGATTGGGAAATCTTAAAAGTTTTACTTTCAGGGTTCCAACATGCGACGGATTATTTCAGCTCCAGGAACATACTTGGAACTGGAGATGATCAGCTCGGCAGTTCACAATTTTATTGGCACCCTCATCGATTGCCACAAAATGCAGAACCTATTCTTAAAAAGGAAAATGGGTTTGACAACTGCTTTGAGACCAAAGCAAAAGGAATGGGGAAGGTCAACCACAAGAAGTTCCTTTTTGTTAAGCATATCATAAGAAATGAATTCCATCCCAAAATAATCATAAAGATAAAGAATCCCATCATCCAAAACAATGACCTAATAACCTGTCTTTATAAGCATAACCTCAAGGATCCGGGGGAAGATCGTCGTTATTATGAATATACAGCCACTTATCGTCGACAACAGCGGATGTACCACAACTTTGAGGGAATGCTAAAGCGAGTGGCAATGGAACTTACACACATTAACAACAAACTACCTAGAGGAGTTCATGGGGAAGCAAATGCCGACCTGGTGTTTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGAACGCTCTAGCGAGCTGGAAATCTCCTGACATTCATGTCTGTAATTGGTCAGGGATAAGATGCAACAATGCAAGTGACAGAAGAGTCATAGAGATTGATCTCAATGGAAAATCTGTAGGTGGCATAATTTCCCCTGCTATTTCCAACCTCACTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCGAATGAGTTAGGCTTCTTAACTCAACTGGGGCAACTCAGTTTATCTTGGAATTTTCTTCAAGGAGAAATTCCAACTGAATTGGGTTCACTTCATAACTTATATTACCTTGACATGGGAAGCAACCAGCTTGAAGGTGAGATTCCAGAATCACTTTTCTGTAATGGTTCTTCTTCCTTATTGAGGTATATAGATCTCTCCAACAATTCCTTAATGGGACATATCCCATTGAACAATGAGTGTATGCTTCTAGAAGTTAGGTTCCTCTTACTTTGGTCTAATAAGCTTGTAGGCCAAATTCCTCCAGCTCTTTCTAACTCCACACAGCTAAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGTGAGTTACCACATGAGATGGTTAGTTGGCCTGAACTACAATTCCTTTATTTGTCTGATAATGACTTTTTGAGCCATGATGGAAACACCAACCTTGAACCTTTCTTTGATTCTTTGAGAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGATCTTCCTAAAAGCCTTGTTCAGCTTCATCTTGATAACAATCTCATTTATGGCCCCATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTTTACTGAATTTTTCTAGTAATCTACTGAATGGATCTATTCCTTCTAGCATATGGAAGATGGGAAAGCTTGAGAGAATCTATTTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGAACTTGGTGGCATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTGTACAAAAACCGGCTTTCTGGAACGATCCCACCGAGTCTTGGAAAATGCGTCAATTTGGAGATTTTGGACCTATCTAGGAACAGAATTTCCGGGGTGATTCCTACAGAAGTTGCCGCCTTAACTAGCTTGAAACTATACTTGAACTTGTCAAGCAACAACTTGAATGGCCCGTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATTTATCTAACAACAATCTCTCAGGCAGAATCCCACCTCAGCTTGAAAGCTGCATAGCTCTAGAATTCCTTAACCTTTCTGGTAACTCCTTAGAGGGCCCTCTCCCTTTTCCATTAGGCCAATTGCCTTATATAAAGGCACTTGATGTCTCTTCAAATAGGTTAATTGGGCCAATACCAGAGTCCCTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTCAACAATTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTTACCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGAAAAGCTGCCACAAGAAACACAGTTATCATTTTGTTCTCCTTATAATTCCTGTGTTTCTATTTGCCACTCCCCTCTTGTGCATGTTCGGCTACCGATTGGCACATATGGTGAAATCTCCAAGGCAATTGGCCATATTTGGCAGAAATGACTGTGAGAGCGATGAAGAGGAAACGAAGGAGCTAAAGTACCCAAGCATTTCATATAAAAAACTTATTGAAGCCACTGGAGGATTCAGTGCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTTTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGAGTATGGCCTCGAATAATAGTAGCTCGGCATCTTTCAGTTCAACACATGACTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACACTGGGTGATGTGTACAGTTATGGAGTATTACTACTAGAAATAGTGACAGGTAGGCCTCCAACGGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAGTACCCATACAAGCTTAACAACGTTGTTGAGAAGACATTGCAAAGGTGGTCACATTCACATTCTGGGCAACAACAATATGACAGCAGCAAAATCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGGCTTCTCTGCACTCAGTATAATCCTCTGACAAGGCCAAGCATGATGGATGTAGCTCAAGAAATAGGAATGTTGAAGGACTACTTGTGTAATCCATCATCTTATGATGAAGCAGTTAACTCTAAGGTTGATGATTCCTTTTGTAGTGAAGATAATTTACTTGAAAAGTAA 3060 0.4016 MIVKKRDFLDWEILKVLLSGFQHATDYFSSRNILGTGDDQLGSSQFYWHPHRLPQNAEPILKKENGFDNCFETKAKGMGKVNHKKFLFVKHIIRNEFHPKIIIKIKNPIIQNNDLITCLYKHNLKDPGEDRRYYEYTATYRRQQRMYHNFEGMLKRVAMELTHINNKLPRGVHGEANADLVFDKSSLISFMRGIVSDPKNALASWKSPDIHVCNWSGIRCNNASDRRVIEIDLNGKSVGGIISPAISNLTSLKILDLSENFFVGHIPNELGFLTQLGQLSLSWNFLQGEIPTELGSLHNLYYLDMGSNQLEGEIPESLFCNGSSSLLRYIDLSNNSLMGHIPLNNECMLLEVRFLLLWSNKLVGQIPPALSNSTQLKWLDLESNMLSGELPHEMVSWPELQFLYLSDNDFLSHDGNTNLEPFFDSLRNLSNLQELELAENNLGGKLPSNIGDLPKSLVQLHLDNNLIYGPIPPQISNLVNLTLLNFSSNLLNGSIPSSIWKMGKLERIYLSNNSLSGEIPSELGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYKNRLSGTIPPSLGKCVNLEILDLSRNRISGVIPTEVAALTSLKLYLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEFLNLSGNSLEGPLPFPLGQLPYIKALDVSSNRLIGPIPESLLLSSTLKKLNFSFNNFSGNIPNKGAISSLTIDSFLGNDALCGSIKGMKSCHKKHSYHFVLLIIPVFLFATPLLCMFGYRLAHMVKSPRQLAIFGRNDCESDEEETKELKYPSISYKKLIEATGGFSASSLIGSGRFGHVYKGVLRDNTRIAVKSMASNNSSSASFSSTHDLLCGSVGYIAPEYGMGKKASTLGDVYSYGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLNNVVEKTLQRWSHSHSGQQQYDSSKIWQDVVLELIELGLLCTQYNPLTRPSMMDVAQEIGMLKDYLCNPSSYDEAVNSKVDDSFCSEDNLLEK 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1008 1019 SUPERFAMILY Protein kinase-like (PK-like) 804 983 IPR011009 -
Lele21g1008 1019 Pfam Protein kinase domain 861 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g1008 1019 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 523 746 - -
Lele21g1008 1019 FunFam Leucine-rich repeat receptor-like protein kinase 181 343 - -
Lele21g1008 1019 Gene3D Ribonuclease Inhibitor 519 623 IPR032675 -
Lele21g1008 1019 Gene3D Ribonuclease Inhibitor 182 347 IPR032675 -
Lele21g1008 1019 Gene3D Ribonuclease Inhibitor 416 518 IPR032675 -
Lele21g1008 1019 Pfam Leucine Rich Repeat 504 523 IPR001611 GO:0005515
Lele21g1008 1019 Pfam Leucine rich repeat 355 410 IPR001611 GO:0005515
Lele21g1008 1019 Gene3D Ribonuclease Inhibitor 348 415 IPR032675 -
Lele21g1008 1019 SMART LRR_typ_2 429 453 IPR003591 -
Lele21g1008 1019 SMART LRR_typ_2 550 574 IPR003591 -
Lele21g1008 1019 SMART LRR_typ_2 526 549 IPR003591 -
Lele21g1008 1019 SMART LRR_typ_2 478 502 IPR003591 -
Lele21g1008 1019 SMART LRR_typ_2 297 321 IPR003591 -
Lele21g1008 1019 SMART LRR_typ_2 249 273 IPR003591 -
Lele21g1008 1019 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 424 519 - -
Lele21g1008 1019 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 860 985 - -
Lele21g1008 1019 Pfam Leucine rich repeat N-terminal domain 183 221 IPR013210 -
Lele21g1008 1019 Gene3D Ribonuclease Inhibitor 624 735 IPR032675 -
Lele21g1008 1019 SUPERFAMILY L domain-like 477 734 - -
Lele21g1008 1019 SUPERFAMILY L domain-like 191 413 - -
Lele21g1008 1019 Gene3D Transferase(Phosphotransferase) domain 1 839 1005 - -
Lele21g1008 1019 ProSitePatterns Protein kinases ATP-binding region signature. 823 845 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1008 Lele-ChrLele21 7152675 7160593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1008 866 985 Receptor kinase-like Gene Family AT3G47570 32.500 2.79e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele21g1008 Pkinase 7e-08 CL0016