Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0999 ATGGCGAAACTATCACAACACAAGAACAATGCCAGCAGCAATAATGTTATCAACAACAACCACCTTGGCGTCACAAACACTAGTGTTCCCTCCAAGGTCAAACGAACAAGAAGAAGTGTCCCCAGAGACTCTCCTCCTCAACGTAGCTCTATATACCGAGGAGTCACTAGGCACCGGTGGACTGGCCGGTATGAAGCTCACTTGTGGGACAAGAATTGTTGGAACGAATCGCAGAACAAGAAAGGGAGACAAGGGGCCTATGACGATGAAGAAGCAGCAGCACATGCTTATGATTTAGCAGCATTGAAGTACTGGGGTCAAGATACAATCCTTAACTTTCCGTTGGCAACGTACCAGAACGAACTGAAAGAAATGGAGGGTCAATCAAGGGAAGAGTATATTGGATCGTTAAGGAGGAAAAGCAGCGGTTTTTCCAGGGGAGTTTCTAAATACAGAGGCGTTGCCAGACATCATCACAATGGAAGATGGGAAGCTCGTATTGGCAGAGTTTTTGGCAATAAATATCTCTATCTTGGTACTTATGCTACTCAAGAAGAAGCTGCCGCCGCTTATGATATGGCGGCTATAGAATACCGTGGGCTTAACGCCGTCACCAACTTCGATCTCAGCCGTTATATCAAGTGGCTTAAGCCTAATTCCAACGCCAACAGTACTATTAATCTTACTACTGATCAATCTAACTGTGACCCTAACGGTAATGTTACCACCACCTTAACAACATCAAACCCTGCTACTGCTCAAGAGCATAGATTCAGCTTCTTCCACAACCATCAGCTTCAGGAATCCTTCGACGTTAATGGTGGAGAAGAAGCCATGCTGACTCAGCCTGGTCCGCCGGCGACAACTGCCACATCAGCCCTAGGGCTGCTGCTTCAGTCGTCCAAGTTCAAGGAAATGATGGAGATGACGTCCACCACCGCGGATTTGCCTGCGCCGGCGGCACCGGAGTCTGAGATGCTGCTGCAGTACAGGTTTCCGGATGATATTCAGACGTACTTTGAGTGTGAAGACTCTAACAGTAATGGGGAAGGGGATTATCATATCATGTTCAGCGAGCTCAACTCCTTCGTTCCTACTCTGTTTCACTGTGATGACTTTGAAGCCTGA 1128 0.4734 MAKLSQHKNNASSNNVINNNHLGVTNTSVPSKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLATYQNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNSNANSTINLTTDQSNCDPNGNVTTTLTTSNPATAQEHRFSFFHNHQLQESFDVNGGEEAMLTQPGPPATTATSALGLLLQSSKFKEMMEMTSTTADLPAPAAPESEMLLQYRFPDDIQTYFECEDSNSNGEGDYHIMFSELNSFVPTLFHCDDFEA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0999 375 FunFam AP2-like ethylene-responsive transcription factor 149 210 - -
Lele21g0999 375 SUPERFAMILY DNA-binding domain 50 115 IPR016177 GO:0003677
Lele21g0999 375 SMART rav1_2 51 120 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 SMART rav1_2 150 214 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 ProSiteProfiles AP2/ERF domain profile. 51 114 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 MobiDBLite consensus disorder prediction 1 54 - -
Lele21g0999 375 CDD AP2 149 210 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 273 - -
Lele21g0999 375 PRINTS Ethylene responsive element binding protein signature 190 210 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 Gene3D AP2/ERF domain 51 116 IPR036955 GO:0003700|GO:0006355
Lele21g0999 375 Gene3D AP2/ERF domain 149 210 IPR036955 GO:0003700|GO:0006355
Lele21g0999 375 MobiDBLite consensus disorder prediction 1 34 - -
Lele21g0999 375 Pfam AP2 domain 149 200 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 Pfam AP2 domain 51 106 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 ProSiteProfiles AP2/ERF domain profile. 150 208 IPR001471 GO:0003700|GO:0006355
Lele21g0999 375 SUPERFAMILY DNA-binding domain 149 210 IPR016177 GO:0003677
Lele21g0999 375 FunFam AP2-like ethylene-responsive transcription factor 50 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0999 Lele-ChrLele21 7063671 7065989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0999 47 262 AP2-EREBP Transcription Factor Family AT5G57390 58.009 1.07e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele21g0999 AP2 3.8e-09 CL0081