Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0980 ATGCAAAATCCCAGCTCAGAGAAGCTAGAATTTCTGCAGAAATGGATGGAGGGTATGGGAAAATGCACGTCCTTTAAGAACAACATGAGCTTGTTGGAGAGGAAGAAGGCCATAAAAGTTTCAGCAGATTTAGCCATGGCTTCTACCAGAACTGAATCCAAGTGTTGGAGCCGAGCCCTTATTGGCAATATTGCTTCCAGAGACCACAACAGCAAACTCCTTACAGAGCACATGATAGGGTCTTCACAGTGCTACAGGCTAAGAAAAGCTTTCACTTCTCATCCTCCTCCTCCTCCTCCTCCTCCTTCGTCTCTGCTCAAGAACAAGAAGATGCTTGATAGAAGTAGAACGAAGATAATGAAGAGAAGGCGCCGTACAATTCGCAGTAGAGTGAAGAAAATAGTGATGGCGGATTCTATTGCAAGGAAGCTGGTCCAAAAGAGAACACAAATGCTTAAGAAGCTTGTTCCAGGTGGCGATCTTATGGACGATGATGTGTCTTTGATTGAAGAAACCCTAGATTATATTCAATCCCTCCGATCTCAAGTTCAAGTAATGCGCTGTCTTCTCTCTACCTCCCACCTCATGAAATGTTCCTAA 600 0.4417 MQNPSSEKLEFLQKWMEGMGKCTSFKNNMSLLERKKAIKVSADLAMASTRTESKCWSRALIGNIASRDHNSKLLTEHMIGSSQCYRLRKAFTSHPPPPPPPPSSLLKNKKMLDRSRTKIMKRRRRTIRSRVKKIVMADSIARKLVQKRTQMLKKLVPGGDLMDDDVSLIEETLDYIQSLRSQVQVMRCLLSTSHLMKCS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0980 199 CDD bHLH_AtIBH1_like 145 190 IPR044549 GO:0006355
Lele21g0980 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 191 IPR044660 GO:0006355
Lele21g0980 199 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0980 Lele-ChrLele21 6868400 6868999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0980 1 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.175 4.73e-32 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0980 21 6868400 6868999 Lele21g0980 21 6868400 6868999 ECH
Lele21g0980 21 6868400 6868999 Lele23g1071 23 16282462 16283055 hybridization
Lele21g0980 21 6868400 6868999 Lele24g0968 24 6921954 6922725 hybridization