Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0975 ATGGCTCTGAAAATGAAAGCCATGTTAGTAATGGTGGGGCTTGCCATCTTGAGCCTTTCCTCAGTGGCTTCTGCTATTTCTGGAACTGCCACCTTTTACACTACTTATGTTCCATCTGCATGCAATGGATTCCAAGACCAGGGAATTATGATCGCTGCGGCGAGCGACTCCATCTGGGACAACGGGGCTGCTTGCGGGAGACTGTATAGGGTCAGGTGCATTAGTGGGACCAACCAAGGCGTGGCTCAGCCTTGCCGGGGGGGAGCCGTCACCGTCAAGATTGTCGATCGCTGCCCTCATCCGGCATGCCGAGGAACCATCGATCTCTCTCAGCAAGCCTTCTCCGCCATCGCCGACCCTAACGAAGGAAAAATCAACATTGAATACACCCGGGTATGA 399 0.5363 MALKMKAMLVMVGLAILSLSSVASAISGTATFYTTYVPSACNGFQDQGIMIAAASDSIWDNGAACGRLYRVRCISGTNQGVAQPCRGGAVTVKIVDRCPHPACRGTIDLSQQAFSAIADPNEGKINIEYTRV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0975 132 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 132 IPR007112 -
Lele21g0975 132 Pfam Lytic transglycolase 52 129 IPR009009 -
Lele21g0975 132 SMART dpbb_1 51 129 IPR007112 -
Lele21g0975 132 SUPERFAMILY Barwin-like endoglucanases 16 132 IPR036908 -
Lele21g0975 132 Gene3D - 17 132 IPR036908 -
Lele21g0975 132 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 130 IPR044206 GO:0009627|GO:0048046
Lele21g0975 132 FunFam Barwin-related endoglucanase 25 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0975 Lele-ChrLele21 6815947 6816557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0975 50 131 Expansin Gene Family AT2G45110 35.484 2.79e-09 51.6