Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0974 ATGAAAGCGGTGTTAGTAATGGTGGGGCTTGCTATCTTGAGCCTTTTCTCAGTGGCTTCTGCTATTTCTGGAACTGCCACCTTTTACACTACTTATGTTCCATCTGCATGCAATGGATTCCAAGATCAGGGAATTATGATCGCCGCGGCGAGCGACTCCATCTGGGACAACGGGGCTGCTTGCGGGAGACTGTATAGGGTCAGGTGCATTAGTGGGACCAACCAAGGCGTGGCTCAGCCTTGCCGGGGGGGAGCCGTCACCGTCAAGATTGTCGATCGCTGCCCTCATCCGGCATGCCGAGGAACCATCGATCTCTCTCAGCAAGCCTTCTCCGCCATCGCCGACCCTAACGAAGGAAAAATCAACATTGAATACACCCGAGCTGCCAAGCATGTTAACACCATAACCAGCCAACTTGTCACTATAATTTCGCAGCCCTACAGCTACAATGCCATTGCTTGGAATTAG 468 0.5214 MKAVLVMVGLAILSLFSVASAISGTATFYTTYVPSACNGFQDQGIMIAAASDSIWDNGAACGRLYRVRCISGTNQGVAQPCRGGAVTVKIVDRCPHPACRGTIDLSQQAFSAIADPNEGKINIEYTRAAKHVNTITSQLVTIISQPYSYNAIAWN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0974 155 FunFam Barwin-related endoglucanase 21 127 - -
Lele21g0974 155 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 126 IPR044206 GO:0009627|GO:0048046
Lele21g0974 155 SMART dpbb_1 47 125 IPR007112 -
Lele21g0974 155 Pfam Lytic transglycolase 48 125 IPR009009 -
Lele21g0974 155 Gene3D - 21 128 IPR036908 -
Lele21g0974 155 SUPERFAMILY Barwin-like endoglucanases 12 129 IPR036908 -
Lele21g0974 155 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 24 128 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0974 Lele-ChrLele21 6812483 6814455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0974 46 129 Expansin Gene Family AT2G45110 36.842 2.59e-10 55.5