Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0969 ATGCTTTCGAGATCTTGCTTGGACCTGTTGAGCCTGGTTTCCGTCGATGATTACCGAGCACTGTGTCAGATCCCGAGAGTCTCAACGGTGCCGGGAGTTGTATCGAAATTCGATGCCGCCGAAGACGACCATGCCGATTGTGGGTCCGGATCCGACGACGCCGTTTCGTCCGGGGCGCCTGAGCGCAGGATCATAGTCGCGAACCAGTTGCCGATACGGACTTATCGGGATGCGAACACCAAGAAATGGAGTTTCGAATTCGATAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGGTTACCCTCCGACGTCGATGTTTTGTACGTGGGCTCCTTGAAGGTCGAGATCGAGCCGTCGGAACAAGACGAAGTGGCGCAAGTTTTGCTCGAAAAGTTCCGGTGCGTACCAACGTTCTTGCCCTCTGAAATTCACAATAAGTACTACCATGGCTTCTGCAAGCATTATCTTTGGCCTCTGTTTCATTACATGGTACCCATGTCGACTAGCCAAGGTGCGCGTTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTCGCGAACAAGGTAACAGAGGTGATCAACCCAGATGAGGATTATGTCTGGGTCCATGATTATCATCTGATGATCTTGCCTACACTACTGAGGAAACGGTTCCACCGTGTTAAGCTGGGATTTTTTATGCATAACACATTTCCGTCTTCAGAAATCTATAGAACTATACCCGTTCGTGATGATCTCCTTCGGGCCTTGTTGAATTGTGATTTAATCGGATTTCATACCTTTGATTACGCCAGACATTTCTTGTCTTGTTGTAGCAGGATTTTCGGTCTGGATTATGAGTCTAAGAGGGGTTACATAGGACTAGATTATTACGGTCGGACCGTGATGATTAAGATCTTACCGGCGGGAATCCACATGGGTCAGCTTGAATCGGTGTTTTCCTCGTCGGAGACGGCTGAGAAAATTAGGGAATTGAAGAAACGATTTGAGGGGAAATTTGTGATTTTGGGTATGGATGACATGGATTTGTTCAAAGGTATCAACTTGAAGTTCTTGGCAATGGGGCAGCTCTTGGATATGCACGAGGAATTAAGGGGTCGAGTTGTTTTAGTTCAGATTCTGAACCCTGCAAGGAGCGAAGGTAAAGACATTCAAGATGTTCAAAACGAGACCAATGCGATCGCGAAAGAAGTCAATGAGAAACACGGCCAACCAGGGTACCAGCCAATTATCTTCGTCAACGGCCCAGTTTCAACACTTGAGAAAGCTGCTTACTGTGCCATTTCTGAATGCTGTGTTGTGAATGCTGTGAGAGATGGCATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGTACTGTGCTGGACAAAGCACTTGAAGAAGAAGAAGACAATGATTCAAAAAGGCCTAAGCAAAGTGTCATCATAGTCTCTGAATTCATCGGATGCTCCCCATCTCTGAGTGGCGCCGTCCGAGTGAACCCATGGAACATCGACGAGGTCTCAGAGGCCATGAATCTGGCGATCATAATGCCGGAGGCAGAGAAGCATTTGCGTCATGAGAAGCATTATAAGTATATCAGCTCTCACGATGTAGCTTATTGGGCTCGAAGTTTTGATCAGGACTTGGAGAGAGCATGCAGAGGACATTACCTGAAGAGGTATTGGGGTGTTGGCTTAGGATTGGGGTTCAGAATTGTGGCTTTAGAACCTACATTCAGGAAGCTTTCAGTGGATAACATTGCATCTGCTTATAGAAACACACAAAGTCGTTTGATCCTTCTGGACTATGATGGTACTATGTTGCCGCAATCATCCATGGACAAAACTCCGACCAACGAGGTTATTTCCATCTTGAATTGTCTATGTAGTGATCCCAAGAATACGGTGTTCATTGTGAGTGGTAGAGATAAGAAGTGCCTCAGCAAGTGGTTCTCTCCATGTGAGAAGCTTGGTCTCTCTGCTGAGCATGGTTACTTCACCAGGTGGAGTAGGGATTCTTCTTGGAACTCATGTGGATTGACAATGGACGATGATTGGAAGAAGATTGCAGAACCAGTAATGTTGCTTTACACAGAAGCAACCGATGGATCTTTCATCGAACACAAGGAAAGCGCACTGGTTTGGCATCACCAAGAAGCTGACCCCCACTTTGGATCATCCCAAGCCAAAGAGCTTCTCGATCACCTCGAGAGTGTTCTCGCCAATGAACCAGTCATTGTTAAAAGAGGGCAACACATCGTCGAAGTAAACCCTCAGGGTGTGAGCAAAGGCATAGCAGTGGAAAATCTGATATCAAGCATGAGGATAGAGGGAAAGTCTCTGGATTTTCTGTTGTGCATAGGAGATGATCGCTCAGATGAAGACATGTTTGAGAGCATTGCTGGAACAGTCTCAAATCCAAACCTACCAGCCATAGAACAAGCGTTTGCATGCACAGTTGGTCAGAAACCAAGCATGGCTGAATATTATTTGGATGATACTTGTGAAGTCATCAAGTTGCTCAAAGGACTCGCTAATGCTTTTTCATCAGCAGCTGCAACACAACCACCCTCATCAAGTTCTCTACTACTACAGTCTCAGGAGGATCAATCACAAGGGTATCTATAG 2631 0.4633 MLSRSCLDLLSLVSVDDYRALCQIPRVSTVPGVVSKFDAAEDDHADCGSGSDDAVSSGAPERRIIVANQLPIRTYRDANTKKWSFEFDSDSLVLQLKDGLPSDVDVLYVGSLKVEIEPSEQDEVAQVLLEKFRCVPTFLPSEIHNKYYHGFCKHYLWPLFHYMVPMSTSQGARFDRSQWQAYVLANRIFANKVTEVINPDEDYVWVHDYHLMILPTLLRKRFHRVKLGFFMHNTFPSSEIYRTIPVRDDLLRALLNCDLIGFHTFDYARHFLSCCSRIFGLDYESKRGYIGLDYYGRTVMIKILPAGIHMGQLESVFSSSETAEKIRELKKRFEGKFVILGMDDMDLFKGINLKFLAMGQLLDMHEELRGRVVLVQILNPARSEGKDIQDVQNETNAIAKEVNEKHGQPGYQPIIFVNGPVSTLEKAAYCAISECCVVNAVRDGMNLVPYMYTVCRQGSTVLDKALEEEEDNDSKRPKQSVIIVSEFIGCSPSLSGAVRVNPWNIDEVSEAMNLAIIMPEAEKHLRHEKHYKYISSHDVAYWARSFDQDLERACRGHYLKRYWGVGLGLGFRIVALEPTFRKLSVDNIASAYRNTQSRLILLDYDGTMLPQSSMDKTPTNEVISILNCLCSDPKNTVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWSRDSSWNSCGLTMDDDWKKIAEPVMLLYTEATDGSFIEHKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQGVSKGIAVENLISSMRIEGKSLDFLLCIGDDRSDEDMFESIAGTVSNPNLPAIEQAFACTVGQKPSMAEYYLDDTCEVIKLLKGLANAFSSAAATQPPSSSSLLLQSQEDQSQGYL 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0969 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 597 714 - -
Lele21g0969 876 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 727 857 - -
Lele21g0969 876 CDD GT20_TPS 62 551 IPR001830 GO:0003824|GO:0005992
Lele21g0969 876 SUPERFAMILY HAD-like 598 846 IPR036412 -
Lele21g0969 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Lele21g0969 876 Pfam Glycosyltransferase family 20 62 551 IPR001830 GO:0003824|GO:0005992
Lele21g0969 876 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 599 801 IPR006379 -
Lele21g0969 876 TIGRFAM T6PP: trehalose-phosphatase 597 845 IPR003337 GO:0003824|GO:0005992
Lele21g0969 876 Gene3D Glycogen Phosphorylase B; 316 535 - -
Lele21g0969 876 CDD HAD_TPP 599 840 - -
Lele21g0969 876 Gene3D - 725 856 IPR023214 -
Lele21g0969 876 Gene3D - 597 716 IPR023214 -
Lele21g0969 876 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 554 - -
Lele21g0969 876 FunFam Alpha,alpha-trehalose-phosphate synthase 316 535 - -
Lele21g0969 876 Pfam Trehalose-phosphatase 601 834 IPR003337 GO:0003824|GO:0005992
Lele21g0969 876 Gene3D Glycogen Phosphorylase B; 56 315 - -
Lele21g0969 876 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 847 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0969 Lele-ChrLele21 6774594 6777422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0969 1 871 Trehalose Biosynthesis Gene Families AT2G18700 64.261 0.0 1180