Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0967 ATGAAGTTCAATTTTCGTCCTCGTTTCTCATCTCGCTCCCACCACTCCTACCGACGCCCAACTGGTCATCCACAAACCTCGAACTCTTCCGAATGGTCGGAGTTCACAGTGACCTTAGTTCTTGCTGCTGTTTCCGTTACCTCTGGTATTTCCGTGTACTTGTTCAAGACGAAAACCAAAGCTTTAAACTCCAAGCTTCGTCAGCTTGAGGCATCGCTCAAGTCATCCTTAGAGAAATGCGCCTCTGAGAGGCAAGTCCGCATTAGGTCACAACAGTCCTTGAGAAAAGCACTAACACAACGTAAAAGTGAAAACGTAGAGATGAATTACTATCCCATGGCACCTATTGGCACCATCCAATCGTGCTTCACTACAAGCTACAATTATTTCTTCATTTACTGGGCATCATGCTTGGTTTTGGCGAATAATTGCTTGCTTGATGTTCCATTCATCAACTATCACTTGACATATGTGCAGAAATGGAACGCCAAGGCAACATTACTTGTACCTCTTGCTAGAGCATCTTTGATTTTCAATACAACTCGTGTACCACCAGCTTCACGTGCGGGTCTTGCAGAATATTCTCATTGCTGGGTGATATATGTATTTCATCTAAATACAGATCTTGAGAAGCTATGTAATCATCCATCTAAGTCAAAGTTCAAGGCAAAGGTGGAAGCTGTCCAGGGAAATATGCTTTTGCTTTCTGGTGTGGACCTGGTTGATGGAACTCCAGTGCTTGATGTCAAACCTTATCTACCATACTGTGACAGCGTTGTGGACGCAAAAGTGCCTAATTGGTTGATGGAAGATAACTTGCTTGCGGTAGCTTCTATAAGCTTCTCAGAGGACTTTACTCCAACCCTAGAAACTTGCTGGAGAATGGCAGAAAAACAAGCACTTTATGCATCGGCTGGCGAATTCCAAAGTTTAATAAAGCAGGTTCTTTCATGGGATATTCGGTCAGTTAGTCAGCGGAAGAGACCTCATGATGCCATCTCAAAGAAAGACAATGATGAACAGATGGATGAACCTTCTGATATAGATGAGAACCTAGATGAAGCAGCTTCTGTGCTTGAGAAAGAGCAGAATTTTCTATATTCCAAGGAAGTAACTTATCACCTTATTTTGGAGGGACTGGATGTCTCCTATAGAATTGATGACAATAGTAATGTCATTGTCGAAAAGGTGTCACCTTTTGATGGCATAAGCAATGATCGTAATTCTGTAGCTAGGTCGTTTCTTTGTATCTTGAAATATAAAGTACACTTTACTGTGGCTGATGATACTGGAACTACATCGGTTGTCATTTTCGATGGTGTTGCCTCGAGGCTATTGAACACAAGTGCTAAGCTCTTAAAGGACCAATTGACTGCGGAAGGATGCCCGGATTCTTTTCCCGATGAATTTGAGGATTTGGTTGGTCGGACATGTGTAATGAAATTGAGATTGAGTGAATACAATTCAAAGTACAGACCATCAAGCATTGGTGTCCACGATCTATCTGATGATGCAGACATCATTAGAGAATTCACTCTTTCTGATCCCCAGATGTTTTGTGCTCAAGACTAG 1572 0.4218 MKFNFRPRFSSRSHHSYRRPTGHPQTSNSSEWSEFTVTLVLAAVSVTSGISVYLFKTKTKALNSKLRQLEASLKSSLEKCASERQVRIRSQQSLRKALTQRKSENVEMNYYPMAPIGTIQSCFTTSYNYFFIYWASCLVLANNCLLDVPFINYHLTYVQKWNAKATLLVPLARASLIFNTTRVPPASRAGLAEYSHCWVIYVFHLNTDLEKLCNHPSKSKFKAKVEAVQGNMLLLSGVDLVDGTPVLDVKPYLPYCDSVVDAKVPNWLMEDNLLAVASISFSEDFTPTLETCWRMAEKQALYASAGEFQSLIKQVLSWDIRSVSQRKRPHDAISKKDNDEQMDEPSDIDENLDEAASVLEKEQNFLYSKEVTYHLILEGLDVSYRIDDNSNVIVEKVSPFDGISNDRNSVARSFLCILKYKVHFTVADDTGTTSVVIFDGVASRLLNTSAKLLKDQLTAEGCPDSFPDEFEDLVGRTCVMKLRLSEYNSKYRPSSIGVHDLSDDADIIREFTLSDPQMFCAQD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0967 523 MobiDBLite consensus disorder prediction 1 29 - -
Lele21g0967 523 ProSiteProfiles TsaA-like domain profile. 223 261 IPR023370 -
Lele21g0967 523 MobiDBLite consensus disorder prediction 1 19 - -
Lele21g0967 523 CDD RPA1_DBD_C 416 494 IPR013955 -
Lele21g0967 523 Gene3D - 221 271 IPR036414 -
Lele21g0967 523 SUPERFAMILY YaeB-like 167 332 IPR036413 -
Lele21g0967 523 Gene3D - 334 507 IPR012340 -
Lele21g0967 523 PANTHER UNCHARACTERIZED 166 226 IPR040372 -
Lele21g0967 523 Pfam tRNA-methyltransferase O 168 257 IPR023370 -
Lele21g0967 523 SUPERFAMILY Nucleic acid-binding proteins 416 490 IPR012340 -
Lele21g0967 523 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0967 Lele-ChrLele21 6749351 6755809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0967 21 6749351 6755809 Lele21g0967 21 6749351 6755809 ECH
Lele21g0967 21 6749351 6755809 Lele23g1085 23 16386917 16392735 hybridization
Lele21g0967 21 6749351 6755809 Lele24g0948 24 6746504 6753713 hybridization