Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0963 ATGATGCTTTCTTCTTCTTCTTCACCTAGTAAAATACTTATTGGTCTTCCTTTAGACCCAGATGATAGCAGAGAACTTCTCTCGTGGGCAATTCGAGTTCTTGCCAATCCAAATGACACCATTGTAGCTCTCCACGTTCTTGTTTCTAAGGATAGGAGTAAGAGGAAGAAGAAGAGTGCTTCAATGACAAGAAGGCAATTGCAACTTCGACAGGCTAAAGCTTATGCCATATCTGTGCTTGGTGAATTTGCAAAAACTTGTTGGTCTAAGCAGGTGAATCTGGAAGCTAAAGTGGCATTTAGTTCCCATATAGGTGGAGGTTTAGTTGCAGAAGCCAAGTCCATATCTGCTGATTTTCTTCTTATTCGTGGCTCAAGAAACAAGTCTAACAGGAATCAAGTCTCTGATGGAATTACCAAGTTCTGCTTTGAGAATGTTCATGAAAACTGCACTGTTATCTCAGTTGGTAAAAGTTCCAAATGCGGTCTTACAAAGTCTCAAGATAATTATGAATCAAGTTCAGGGTGGTTTAAGGAGGATAAGCAGAGAAGTAACAGGGGACCATCCCCTCTTTTGAAGGCTTTTACTCAAACACGTTCACCAAGAACAGTTTTGGAGGCACTTGAGGGTCAATCTAACAGCACAGAAGATGATAATACGTTTAGCACAAGGGTTTCAAGCCTCACAGACACTCCTTCAACAGGTTCTAATAAAATGAAAAGTCAATCCAATGATTTAAGGAAACCACCACAGTCCCCATTCAGATTCATAGCCTCACTTATTGCCTCACCATTATTATTAAGAAGGAAGAACTCCAAAAAGTCCCAAAATGAAAAGAGACAGCCCTTGTTGAAATGCTTCAGCTATGAAGAAATCTCCAACGCCACAAGTGGCTTCCACCAAGAGAATTTGGTGGGACGAGGTGGGTACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAACCATTGCAGTGAAAAGGTTGTCCAAGGACAACAAGGATGCTAACAAGGAAAAGGAGTTCCTCATGGAACTAGGAGTCATCGGACATGTCTGTCATCCTAATACTGCATCTTTAGTTGGATGCTGCATTGAAAATGGACTCTATCTGATTTTCAAGTACTCCCAAAATGGAAACTTGGCCACTGCATTGCATGGTAAATCAGCAACGTCACTTGATTGGCCAGTGAGATACAGAATCGCCATTGGAGTAGCAAGGGGGCTGCATTATCTTCACAAGTGTTGCAAACGCAGAATAATTCATCGTGACATTAAAGCCTCCAATGTGCTTCTTGGTCCAGATTATGAACCACAGGCAAAGCCTCTGATAGAATCAGGGAACATTAGGGAGATAGCTGATCCAAGAATGGAAGGCGTATACGATGAAGATGATTTGCGGAGAGTAGTAATCACAGCCTCATACTGTGTGAGACAATCTCCTCTTTGGCGTCCCCCGATGAGCGAGGTGAAAATCAAAATCACCATTAGTGATAACTTTGTGTTTGGTTATAATGAACTGTTATATGATTTGTTTTTGCTTGTTTGGTGGAAGGTGTTGGAGCTGCTAACCAGAGGAGAAGAGAGTGAAGCTGGGAATAGTTGGAGGATTCCAAAGTTCACATCTGATGAATTGGATGATTATTCTATGGCTTTTGGATATGAACTGCCTTCTGACATCTCTCTTGAGGACTTTTTGTGA 1701 0.4162 MMLSSSSSPSKILIGLPLDPDDSRELLSWAIRVLANPNDTIVALHVLVSKDRSKRKKKSASMTRRQLQLRQAKAYAISVLGEFAKTCWSKQVNLEAKVAFSSHIGGGLVAEAKSISADFLLIRGSRNKSNRNQVSDGITKFCFENVHENCTVISVGKSSKCGLTKSQDNYESSSGWFKEDKQRSNRGPSPLLKAFTQTRSPRTVLEALEGQSNSTEDDNTFSTRVSSLTDTPSTGSNKMKSQSNDLRKPPQSPFRFIASLIASPLLLRRKNSKKSQNEKRQPLLKCFSYEEISNATSGFHQENLVGRGGYSEVYRGDLSDGQTIAVKRLSKDNKDANKEKEFLMELGVIGHVCHPNTASLVGCCIENGLYLIFKYSQNGNLATALHGKSATSLDWPVRYRIAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQAKPLIESGNIREIADPRMEGVYDEDDLRRVVITASYCVRQSPLWRPPMSEVKIKITISDNFVFGYNELLYDLFLLVWWKVLELLTRGEESEAGNSWRIPKFTSDELDDYSMAFGYELPSDISLEDFL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0963 566 Gene3D HUPs 3 154 IPR014729 -
Lele21g0963 566 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 127 - -
Lele21g0963 566 MobiDBLite consensus disorder prediction 164 251 - -
Lele21g0963 566 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Lele21g0963 566 SMART serkin_6 299 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0963 566 Gene3D Transferase(Phosphotransferase) domain 1 377 441 - -
Lele21g0963 566 Coils Coil 326 346 - -
Lele21g0963 566 MobiDBLite consensus disorder prediction 189 249 - -
Lele21g0963 566 Pfam Protein tyrosine and serine/threonine kinase 301 434 IPR001245 GO:0004672|GO:0006468
Lele21g0963 566 CDD USP_Like 11 126 - -
Lele21g0963 566 SUPERFAMILY Protein kinase-like (PK-like) 275 437 IPR011009 -
Lele21g0963 566 FunFam Putative receptor-like serine/threonine-protein kinase 267 375 - -
Lele21g0963 566 Pfam Universal stress protein family 16 133 IPR006016 -
Lele21g0963 566 PANTHER OS08G0249100 PROTEIN 440 491 - -
Lele21g0963 566 Gene3D Phosphorylase Kinase; domain 1 261 375 - -
Lele21g0963 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Lele21g0963 566 ProSiteProfiles Protein kinase domain profile. 299 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0963 Lele-ChrLele21 6708311 6711717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0963 256 439 Receptor kinase-like Gene Family AT1G53420 44.503 2.59e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele21g0963 PK_Tyr_Ser-Thr 5.4e-24 CL0016