Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0947 ATGGAATTCATCTTCCGGTCGAAACTGCCAGACATTTACATCCCAACCCACCTCCCACTTCACTCCTACGTCTTCGAGAACCTTTCTCAGGTCAAAGATCGACCCTGCCTCATCGACGGCGACACCGGCGAGACCCTTACCTATGCCGACGTCGAGCTCACCGCCCGCCGTGTCGCCGCCGGCCTCAACAAACTCGGCATCCGACAAGGTGACGTCATCATGCTCGTGCTCCGTAACTGTCCCCAATTCGCTCTCGCCTTCCTGGGAACCTCCTTCGCCGGCGCCGCAGTCACCACTGCCAACCCCTTGTTCACTCAGGCCGAGCTGGCGAAACAAGCCACCGCGTCCAAGTCGAAGCTGATCATAACGCAAGCCACTTTCGTTGAGAAAATCAAGGATTTCGCTGACAAACATGGCGTTTCTTTGATGTGCATTGATTCTACTTTCCCAGAAACGGAAGGTATTTCACATTTTTCTTTACTCACCCAATCCGACGAAGCTGGTATGCCGGCCGTTAAGATCAGCCCCGACGACGTTGTGGCACTGCCGTATTCCTCCGGCACCTCCGGCTTTCCCAAGGGCGTGATGCTAACGCACAAGAATCTGGTAACCTCCGTGGCTCAGCTCGTCGACGGCGAAAACCCGAACCAGTACACCACCAGCGACGACGTACATATCTGCGTTCTTCCAATGTTCCATATCTATGCGCTGAACTCCATTTTGCTCTGCTGCATCCGAGCCGGAGCCGCCGTTCTGACGATGGGTAAGTACGACATCGCCACGTTGTTGAAGATGATCGAGACTTACAAGGTGACAATGGCGTCGTTCGCGCCTCCGATCCTATTAAACATCGTGAAGAGTGAGGAAGTTGACCGGCACGACCTGTCGTCCATAAGAACGATCGTCACCGGAGCAGCGCCGGTGAGCGTGGAGCTGGAACAAGCCCTGAGGGCTAAGCTTCCACACGCCATACTTGGACAGGGATATGGGATGACGGAGGGTGGTCCTCTGTCCATAAGCTTGTCGTTCGCGAAGGAGCCGGTGGAGATGAAATCAGGCGCGTGCGGGAGCGTGATAAGAAACGCAGAGATGAAGATTGTTGACATTGAGACGGGAGCTTCGCTTCCAAGAAACAGAGCTGGTGAAATCTGCATAAGAGGAAATCAAGTTATGAAAGGGTACCTAAACGACCCGGAGGCGACAAAAGCGACGATAGACGAAGAAGGATGGCTTCACACGGGGGACATCGGACACGTAGACGACGACGATGAGGTGTTCGTTGTGGATCGTTTAAAGGAGATAATCAAATACAAAGGTTTCCAAGTGGCTCCCGCTGAGCTAGAGGCTCTTCTCATCTCTCACCCTCTCGTCTCTGATGCTGCCGTTGTTCCGATGAAAGATGAGGCTGCGGGGGAGCTTCCGGTGGCATTTGTGGTTAGGCCATACGGTTCTAAGATCTCTGAGGATGACATCAAGCTCTTCATTTCACAACAGGTGGTGTATTACAAGAGAATCCACAAGGTTATTTTCACAGACACTATTCCGAAAGCAGTCTCTGGCAAAATTTTACGAAAGGATTTAAAAGCAAGGCTTGCATCAGATTTGGGCAATTAA 1614 0.5254 MEFIFRSKLPDIYIPTHLPLHSYVFENLSQVKDRPCLIDGDTGETLTYADVELTARRVAAGLNKLGIRQGDVIMLVLRNCPQFALAFLGTSFAGAAVTTANPLFTQAELAKQATASKSKLIITQATFVEKIKDFADKHGVSLMCIDSTFPETEGISHFSLLTQSDEAGMPAVKISPDDVVALPYSSGTSGFPKGVMLTHKNLVTSVAQLVDGENPNQYTTSDDVHICVLPMFHIYALNSILLCCIRAGAAVLTMGKYDIATLLKMIETYKVTMASFAPPILLNIVKSEEVDRHDLSSIRTIVTGAAPVSVELEQALRAKLPHAILGQGYGMTEGGPLSISLSFAKEPVEMKSGACGSVIRNAEMKIVDIETGASLPRNRAGEICIRGNQVMKGYLNDPEATKATIDEEGWLHTGDIGHVDDDDEVFVVDRLKEIIKYKGFQVAPAELEALLISHPLVSDAAVVPMKDEAAGELPVAFVVRPYGSKISEDDIKLFISQQVVYYKRIHKVIFTDTIPKAVSGKILRKDLKARLASDLGN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0947 537 ProSitePatterns Putative AMP-binding domain signature. 182 193 IPR020845 -
Lele21g0947 537 Gene3D - 432 534 IPR045851 -
Lele21g0947 537 FunFam Long-chain-fatty-acid--CoA ligase FadD 6 432 - -
Lele21g0947 537 CDD 4CL 14 527 - -
Lele21g0947 537 FunFam 4-coumarate--CoA ligase 2 433 534 - -
Lele21g0947 537 Pfam AMP-binding enzyme 26 437 IPR000873 -
Lele21g0947 537 SUPERFAMILY Acetyl-CoA synthetase-like 5 533 - -
Lele21g0947 537 Gene3D - 1 431 IPR042099 -
Lele21g0947 537 Pfam AMP-binding enzyme C-terminal domain 446 521 IPR025110 -
Lele21g0947 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0947 Lele-ChrLele21 6525454 6532560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0947 2 499 Monolignol Biosynthesis Gene Families AT1G51680 64.286 0.0 643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0947 21 6525454 6532560 Lele21g0947 21 6525454 6532560 ECH
Lele21g0947 21 6525454 6532560 Lele23g1105 23 16597054 16604215 hybridization
Lele21g0947 21 6525454 6532560 Lele24g0925 24 6520873 6523033 hybridization