Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0941 ATGGTTGTACACTTGTACGTCATAAACGAAATCTATCGATTGCAGCCAAGGTCATCTGGTAAAGTCATGGATACAGATGAGGAGTTGTCAATTGTTCTCGAACTATCTAAGGATGACTTTTTCTTTGATAAAAAGGAGAAATTACTACGAAGTAAAGGTTTTAGTTCCAAGGAACAATTGTCTCTCCAGAGCTCTTCAAAGCCAGGTTGGATGAGTGATACTGTGAAAGTACTGGTTCAGATTGCAAGAATCATACATTTGAATGAGGTGGAGCTTTATTTTGCTGATGATGCAAGTATATCAGGGGAATTTCACAGCCCTAGGAATGAGTTAGAGGCTCTCAATTACATCATTTCTCACCTTGACCCGTTACTTTCTAGTTGTAAGCATCCTTACACAAATATACTGCAAGAGTTGCGGACAACAATTCTTGCCTTAATTTCTGATTTTGGGGACAAGAACAGTTTGGGAGCAATAGTCGAAAAAGAGCTTAGATGTGAACAAGAAGAACAACTTTTAGAATGGGGTAAAAGCAATGGTGTAAGGACACAATTACAGATAGCATATGTCAAAGGAGCAGGTCGAGGTGCCATAGCAGAAAAAGATCTTAAAGTTGGAGATGTTGCTCTAGAAATTCCAGTATCCGTTATCATCAATGAGGAGCTTGTGCGTGAAACTGATATGTACTGTGTCCTCAAGGAAGTTGAAGGTATATCATCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAAGCACAATCAGGATTCAAGATTTAGAATTTACTTTGACTCACTCCCAGTAAAATTCAATACCGGGTTGAGCTTTGGTATTGATGCAATCACAACATCAGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGGGAGCACCTTCATGCTCAGTATGATCAATTATTCCCTACCTTGTGCAATGCTTTTCCTGATATATTTCCGCCAAAGCTGTTCACGTGGGAGGAATTTCTATGGGCCTGTGAACTCTGGTACTCAAATAGTATGAAGATAATGTTTTCTGATGGAACTTTAAGGACGTGTTTAATTCCCATTGCTGCATTTCTTAATCATTCGCTGTGCCCACACATTCTGCTCTATGGCAAAGTAGATCCTGCAACAAATTCATTGAAATTTCCTCTTTCAAGACCATGCAGATCTGGAGAAGAATGCTGTTTAAGCTATGGGAACTTCTCTAATTCTCATTTCATTACCTTTTATGGTTTCTTGCCACAAGGAGACAACCCATACAACGTCGTCCCACTTGACATTGATGCTTCTGGCACTGATTCTATGAAGGATGAACCGTCGTCCAGCTGGACCTATCACATGGTGCGGGGTACTTGGCTCTCCAACAACCACAATTTGTACTATTATGGCCTCCCCTCCCCATTGTTGGACTATTTTCGAAGATCTCGAGATCCCATGTTGCATACTAAGACCTTTTTGCAAGGGGACTTGGAAAATGAGCTGGAAATGCTAGAAGATCTAAGATTTATCTTCCAAAGCATGATGGACAATTTGGATGACACAAGTCTTGATGACAGAGAAAACAGCAGTTGGGATGAAAAATTGGCACTGGAGTATAAAATTCAACAAAGACGAATTGTCTCCTCTATCTCAACTTCATGTAATACTGGTATCGATATGGTCAGGAATGAACTATGCAAGTGCATGGCTGAGGACATCCGAGGAGGTGTCCCTCTTAATTCTGTCGAACAAAACCATGTGATTCATGGCGTTCCAGATCCCATTTTAAGTGCGGCTCTAGTTTTACAGTATAATCCAATGACAGTTTATGTTCAATTTGTGACGTTTGGCTTCTTTTTGTTATGA 1851 0.4019 MVVHLYVINEIYRLQPRSSGKVMDTDEELSIVLELSKDDFFFDKKEKLLRSKGFSSKEQLSLQSSSKPGWMSDTVKVLVQIARIIHLNEVELYFADDASISGEFHSPRNELEALNYIISHLDPLLSSCKHPYTNILQELRTTILALISDFGDKNSLGAIVEKELRCEQEEQLLEWGKSNGVRTQLQIAYVKGAGRGAIAEKDLKVGDVALEIPVSVIINEELVRETDMYCVLKEVEGISSETILLLWSMKEKHNQDSRFRIYFDSLPVKFNTGLSFGIDAITTSEGTLLLEEIMEAREHLHAQYDQLFPTLCNAFPDIFPPKLFTWEEFLWACELWYSNSMKIMFSDGTLRTCLIPIAAFLNHSLCPHILLYGKVDPATNSLKFPLSRPCRSGEECCLSYGNFSNSHFITFYGFLPQGDNPYNVVPLDIDASGTDSMKDEPSSSWTYHMVRGTWLSNNHNLYYYGLPSPLLDYFRRSRDPMLHTKTFLQGDLENELEMLEDLRFIFQSMMDNLDDTSLDDRENSSWDEKLALEYKIQQRRIVSSISTSCNTGIDMVRNELCKCMAEDIRGGVPLNSVEQNHVIHGVPDPILSAALVLQYNPMTVYVQFVTFGFFLL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0941 616 FunFam Transcription factor, E2F and DP-related 167 415 - -
Lele21g0941 616 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 153 519 - -
Lele21g0941 616 Pfam Rubisco LSMT substrate-binding 37 129 IPR015353 -
Lele21g0941 616 CDD SET_LSMT 185 415 - -
Lele21g0941 616 ProSiteProfiles SET domain profile. 183 401 IPR001214 GO:0005515
Lele21g0941 616 Gene3D set domain protein methyltransferase, domain 1 166 415 - -
Lele21g0941 616 Pfam SET domain 194 401 IPR001214 GO:0005515
Lele21g0941 616 SUPERFAMILY SET domain 168 422 IPR046341 -
Lele21g0941 616 Gene3D - 24 146 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0941 Lele-ChrLele21 6473931 6479005 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele21g0941 SET 6.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0941 21 6473931 6479005 Lele21g0941 21 6473931 6479005 ECH
Lele21g0941 21 6473931 6479005 Lele23g1109 23 16645872 16654643 hybridization