Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0928 ATGGACTCTTCTTCTCACAACTGGCTTGCTTTCTCTCTCTCCAATCACTCCTCTCTTTTCCATTCATTCCCTTCTCCACCCCCAGGGAGCACCGTCGACGCCTCGCTGGAGGCCGCTGTCGGAGGAGGTGCAACCAGCAACGACCTGTCCGTCTTCGCCGGAGGCGGCCCCAAGTTCGAGGACTTCCTTGGCGGCGGCTCTTCCTCTACGTCGGTCACAGCTGCAGTGCCCACGCCGCCTGCTGCTCATCAGTTCTCCACCGACGTGTTTGGTTCTGAGCTCAAAACCATAACCGACGGCTTTCTCCCCGGCTTGGCCGTCGCTGAACATGCCCAGCTGCGAAAACAGGCACTGGCTCTCGCCGTGCCGTCCTCTAAGAAGACTGCGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTAACTCGGAAGAGTAGTGGTTTCTCTCGAGGAGCCTCAATATACAGAGGAGTGACCAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATTGGTAGAGTTGCCGGAAATAAAGACCTTTATCTCGGCACATTTAGTACACAAGAAGAAGCTGCTGAAGCATACGATATAGCAGCCATAAAATTTAGAGGACTAAGTGCAGTTACCAACTTCGACATGAGCCGATACGACGTGAAGAGCATCGCCAACAGCAGTCTTCCCGTAGGAGGATTCTCATCCAAAGCCAAGAACTCCTCAGATACTTCTGCGTCAGACACCAAAAGCAACGATGGAAGCCAATCTGCCGACCGAGAGTCTTCTGCGGCGACCTTCGCCTCCCAACCACCCTCGACCTCAAACCTCAGCTTCGCCATACCCATCATGAAACAAGACCCAACCATGGATTACTGGTCCAATAGCTTGGGATACCATCAGAACCCTGCATCTCATCTCAGAAACACTTCCAACAACAATGCCATCATTGCCTCTCATTTTCAAAGCTACAGCAGCAACAACAATAATAACAACACAACGGTACCGTTCAGTTTGGAGTTGCAGGGAACTAACAACAACAACAACAATGCATTTATGGATGGGAGTGTGATTGTTCAGAACATTCAGCAGCAACAACAAAGTGGAAGCAATAATAACAACAATAACAAAAACAGTGGAACAGTGGAATCAAGTTCAAGTTCAGTGATAGCAATGGCGACAGCGATAGGTATAAATAATAGTAACGGTAGGTATGAGAGTGATTCTGTATATGGAAACTGGAGCATAGGGAGTGGTCTTCACACATTCCAAACACATGCAAAAGGAAGTCTCTTTCAAACGCCAATATTTGGGATGGAATGA 1317 0.5004 MDSSSHNWLAFSLSNHSSLFHSFPSPPPGSTVDASLEAAVGGGATSNDLSVFAGGGPKFEDFLGGGSSSTSVTAAVPTPPAAHQFSTDVFGSELKTITDGFLPGLAVAEHAQLRKQALALAVPSSKKTADTFGQRTSIYRGVTRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLSAVTNFDMSRYDVKSIANSSLPVGGFSSKAKNSSDTSASDTKSNDGSQSADRESSAATFASQPPSTSNLSFAIPIMKQDPTMDYWSNSLGYHQNPASHLRNTSNNNAIIASHFQSYSSNNNNNNTTVPFSLELQGTNNNNNNAFMDGSVIVQNIQQQQQSGSNNNNNNKNSGTVESSSSSVIAMATAIGINNSNGRYESDSVYGNWSIGSGLHTFQTHAKGSLFQTPIFGME 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0928 438 MobiDBLite consensus disorder prediction 361 383 - -
Lele21g0928 438 MobiDBLite consensus disorder prediction 230 274 - -
Lele21g0928 438 SMART rav1_2 155 219 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 FunFam AP2-like ethylene-responsive transcription factor 154 215 - -
Lele21g0928 438 CDD AP2 154 215 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 144 324 - -
Lele21g0928 438 SUPERFAMILY DNA-binding domain 154 215 IPR016177 GO:0003677
Lele21g0928 438 ProSiteProfiles AP2/ERF domain profile. 155 213 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 Pfam AP2 domain 155 205 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 PRINTS Ethylene responsive element binding protein signature 195 215 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Lele21g0928 438 Gene3D AP2/ERF domain 155 215 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0928 Lele-ChrLele21 6379857 6382731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0928 135 438 AP2-EREBP Transcription Factor Family AT5G57390 44.013 2.99e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g0928 AP2 2.8e-10 CL0081