Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0923 ATGGAGTGGGACAGCAATTCGGATCTAAGCGGCGACGAGGACGAGACCTTCGCGCTCAACGATGGTGGCCCACTTCCCTTCCCGGTCGAAAACTTGCTCCAAACGACTCCCTGTGGGTTCGTCGTCACTGATTCGCTCGAGCCTGACCACCCTATTATTTATGTCAATACTGTGTTTGAGATGGTCACTGGGTATCGGGCAGAGGAAGTGCTTGGTCGCAACTGCCGATTCCTGCAGTGTCGCGGTCCATTTGCTAAAAGAAGGCATCCATTGGTGGACTCTGCTGTAGTTTCAGAAATTAGGAGATGTCTTGATGAGGGGATTGAGTTCCAAGGTGAGTTATTGAACTTTAGGAAAGATGGATCTCCACTGATGAACAGATTGAGGCTGACACCTATATATGGAGATGATGAGACTATAACACATGTCATTGGAATCCAGTTCTTCACAGAGGCAAATATTGATCTCGGTCCTGTTCTGGGTCCTGCAACGAAGGAATCTGCCAAGTCATCTGATCAATTCCGTACTGTTCTTTCAACATTGAGTCCTCTTCCAGTTGGGGACCGTAATGTATCTCGTGGAGTTTGTGGGATTCTGCAATTGAGTGATGAGGTACTATCTCTCAAGATTCTTTCCCGCCTAACTCCAAGAGATATTGCTTCTGTTAGTTCTGTCTGCAGGCAATTATATGAACTGACAAAAAATGAAAATCTTTGGAGAATGGTGTGTCAAAATGCATGGGGTAGTGAAACTACACGTGTTTTAGAGACTGTGCCTGGTGCAAGGAGGCTTGGATGGGTTCGACTGGCAAGGGAGCTGACTACTCTTGAAGCAGCAGCATGGAGGAAGCTGACTGTTGGAGGTGCTGTTGAACCCTCACGCTGTAATTTTAGTGCCTGTGCAGTTGGTAATAGGGTTGTCTTATTTGGTGGTGAAGGGGTTAACATGCAACCTATGAATGACACCTTTGTATTGGATCTAAACTCAAAAAATCCAGAGTGGCAACACGTCCAGGTGAGTTCACCTCCTCCTGGTCGTTGGGGCCACACAATTTCCTGTGTGAATGGTTCAAATTTGGTTGTATTTGGGGGCTGTGGAAGGCAGGGCCTGCTCAATGATGTGTTTGTACTGGACCTGGATGCAAAGCCTCCTACTTGGCGGGAAATATCTGGATTGGCACCTCCGCTTCCAAGATCATGGCATAGCTCCTGTACTCTTGATGGTACCAAGTTGATAGTTTCTGGTGGCTGTGCAGATTCTGGAGTACTTTTGAGTGACACATTCCTCCTTGATCTGTCCATGGAGAAACCAGTCTGGAGAGAAATACCTGTGACATGGACTCCACCTTCTCGTCTGGGGCACACGCTATCTGTTTATGGTGGTAGGAAAATACTAATGTTTGGAGGTCTTGCTAAGAGTGGGCCCCTGCGGTTTCGTTCCAGTGATGTATTCACCATGGACTTAAGTGAGGAGGAACCATGTTGGAGATGTGTAACCGGGAGTGGAATGCCCGGTGCTGGGAATCCTGGGGGCATAGCCCCCCCTCCTAGACTCGATCATGTTGCAGTTAGTCTCCCAGGTGGGAGAATCCTGATATTTGGTGGGTCTGTCGCGGGTCTTCACTCTGCCTCCCAGCTTTACATCCTGGACCCAACTGAAGAGAAACCTACGTGGAGAATCCTGAACGTACCAGGGCGCCCTCCTAGATTTGCTTGGGGACACAGCACGTGTGTTGTTGGAGGGACAAGAGCTATTGTACTGGGTGGTCAAACTGGAGAGGAATGGATGCTAAGCGAGCTCCATGAGCTTTCTCTGGCAACTGCTAATTGGGTGGTGGTGGATGGCTCAGACAGATCTGGACTTGTTAGTGCAGCTCAGTGA 1881 0.488 MEWDSNSDLSGDEDETFALNDGGPLPFPVENLLQTTPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSAVVSEIRRCLDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANIDLGPVLGPATKESAKSSDQFRTVLSTLSPLPVGDRNVSRGVCGILQLSDEVLSLKILSRLTPRDIASVSSVCRQLYELTKNENLWRMVCQNAWGSETTRVLETVPGARRLGWVRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSKNPEWQHVQVSSPPPGRWGHTISCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLATANWVVVDGSDRSGLVSAAQ 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0923 626 FunFam Adagio protein 1 195 242 - -
Lele21g0923 626 Pfam Galactose oxidase, central domain 294 344 - -
Lele21g0923 626 Pfam Kelch motif 518 565 IPR011498 GO:0005515
Lele21g0923 626 Pfam Kelch motif 451 502 IPR011498 GO:0005515
Lele21g0923 626 TIGRFAM sensory_box: PAS domain S-box protein 32 146 IPR000014 -
Lele21g0923 626 CDD PAS 36 146 IPR000014 -
Lele21g0923 626 FunFam Putative LOV domain-containing protein 271 475 - -
Lele21g0923 626 FunFam Adagio protein 1 27 158 - -
Lele21g0923 626 FunFam Putative LOV domain-containing protein 476 609 - -
Lele21g0923 626 SUPERFAMILY PYP-like sensor domain (PAS domain) 36 147 IPR035965 -
Lele21g0923 626 SUPERFAMILY Kelch motif 440 615 IPR015915 GO:0005515
Lele21g0923 626 ProSiteProfiles PAS repeat profile. 29 107 IPR000014 -
Lele21g0923 626 Pfam F-box-like 206 244 IPR001810 GO:0005515
Lele21g0923 626 Gene3D - 434 625 IPR015915 GO:0005515
Lele21g0923 626 SMART fbox_2 201 242 IPR001810 GO:0005515
Lele21g0923 626 SUPERFAMILY F-box domain 190 260 IPR036047 GO:0005515
Lele21g0923 626 Gene3D - 273 425 IPR015915 GO:0005515
Lele21g0923 626 SUPERFAMILY Kelch motif 281 498 IPR015915 GO:0005515
Lele21g0923 626 Pfam PAS domain 37 147 IPR000014 -
Lele21g0923 626 Gene3D - 194 242 - -
Lele21g0923 626 Gene3D PAS domain 22 158 - -
Lele21g0923 626 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 28 606 - -
Lele21g0923 626 ProSiteProfiles F-box domain profile. 209 242 IPR001810 GO:0005515
Lele21g0923 626 Pfam Galactose oxidase, central domain 358 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0923 Lele-ChrLele21 6332705 6338979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0923 33 148 AGC Kinase Gene Family AT5G58140 34.483 8.19e-15 76.3