Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0906 ATGACGACGGAGAAGGATGGAGCGAGGAAGATGAAGAAGAGTTACTTCGATGTGGTGGGATTGTGCTGTTCATCGGAGGTTCCCATGATTGAGAACATCCTAAAACCTCTGGAAGGAATCAAGGAGGTTTCCGTCATCGTCCCTTCCCGAACCGTCATTGTTATTCACGACACTCTGCTCATTTCAGAGTTTCAAATTGCCAAGGCGCTGAACCAAGCGAGGATGGAGGCGAGTGTGAGGGTGTATGGCGATGAAAAGGAGAAGGAGAAGAAGAAATGGCCCAGCCCTTACGCAATGGCGTCAGGAATATTGCTGGTAGTGTCACTGTTCAAGTACGTGTATGTCCCACTCGAGTACGTGGCCTTAGGAGCTGTAGCTGCTGGGGTTATTCCCATTCTGCTCAAAGCCCTCTCCTCTCTTCGCCACCTGCGACTTGACATTAACATCCTCATCCTCATCGCAGTTGCGGGAACGATAGCTATGCATGATTATGTGGAAGCTGCCACCATTGTTTTCCTCTTCTCCGTTGCTGAATGGCTTGAGTCAAGAGCCAGTCACAGGGCAAGTGCAGCAATGTCATCGTTGATGAACATAGCTCCCCAGAAAGCAACCATAGCCGAAACCAGAGAGATTGTGGACGCCGACGAGGTCAAAGTGAACACCGTCCTAGCCGTTAAAGCAGGGGAAGTGATCCCAATTGACGGAATTGTTGTAGATGGAACCTGTGAAGTCGATGAGAAAACTTTGACCGGCGAGTCATTCCCTGTACCCAAACAGAAGGACTCTACTGTGTGGGCTGGCACTATCAATCTAAATGGTTATATTAGTGTAAAAACTAATGCACTAGCTGAGGATTGCGTGGTGGCGAAAATGGCAAAGCTAGTGGAAGAAGCACAAAACAGTAAAACCAGGAGCCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACACCAGCTGTTGTAATCATATCAACTCTTGTTGCGGTGATTCCAGTTTTGTTGAGAGTGCATAATGCGAAACATTGGTTTCGCTTTGCACTTGTTGTTCTAGTAAGCGCGTGTCCGTGTGCCCTTGTCCTTTCTACGCCAGTTGTGACTTTCTGTGCGTACACAAAAGCAGCCACATCAGGTCTTATCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGAGAATTTATGGTGACAAATTTCCTATCTCTTTGTCATGATGTAGATTTGAAAACGTTGATTTACCGGGTCTCAAGCGTCGAAAGTAAGTCAAGTCATCCATTGGCAGCGGCAATTATTGATTATGGAAAGTCACTTTCTATTGATCCTAAGCCAGAAGAGGTGACAGACTATGAGAATTTCCCTGGAGAAGGTATTCGTGGAAAAATTGATGGGAGATATGTTTACATTGGAAATAGAAAAATTGCCACAAGAGCTGAGTCTAAGACAGTTCCTACCTTAGAAGGTGGCTCTCAAGGAGGAAAGACTATTGGCTATATATACTCAGAAGCAACTCCAATTGGAGTTTTCTCTCTTTCAGATGTTTGCCGATCTGGTGTAGTGGAGGCTATAGGGCAGTTAAAGTTATTGGGTATCAAAACTTCCATGCTTACTGGAGATAGCCATGCAGCTGCCATGCAGGCCCAAGAGCAGCTAGGGCATGCTTTGGAGGAAGTCCACGCAGAACTTTTACCAGAAGGAAAAGCAAAAATCATCACAGAATTCAAAAAGGAAGGATCAACAGCCATGGTTGGAGATGGAGTGAATGATGCACCAGCTTTAGCTGCAGCTGATATTGGTATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAATATAATTCTCATGTCCAATGACATGAGGAAGATACCACAAGCGATTAAGCTTGCAAGAATAGCTCGTAGGAAAGTAATCGAAAATATTATATTGTCAGTTGTGACTAAGGCTGCAATTATTGGCTTGGCCTTTGCTGGTCATCCACTTGTTTGGGCTGCAGTTCTTGCTGATGTTGGGACATGCTTGTTGGTAATCTTAAACAGCATGCTCCTTCTGCACAGTAGAGAGAAGCATAGAGGAAAATGTTGTAGACCTTCCACTCAGCTACACCTCCATAAAAGTGGATGTCATGTCAATGATGGCAAATCTTCTCATCCCCGTCACCATCACGACCACCGCCACCACCATCATCAACACAAGCATGATACTCATCAGCATTCCAAAATCATAGAAAGCCATGACAAATGTAAGTCCAGTGATGAAATCCATGAACCAAATCTCTGTCATCATGGAAGATGTGAGAAAGGTAACGTCCAGTCACATGATGCAGAAAGCAAGAATTGTTCAAGCTCACAGGATAGGTTAATGATCAGAGCAGATAAGTGTACAACTTCAACAGACAGTCATGGTAGTTGCTTGGAACATGGTAACTCCCACAGCACATCAAGTTGCCTCAAAGGAAATTGTGATCCAATCTCTCATGATGGAGTGTCACTGAGTTCTCCCTGCCATTTCATGCACTCACATGATATAGAAAGCCAGGCTTGTTCAGTGTCTTCTCACGCGATTCTGACTGGAGCAAATAAATGTTCGAGTTCAATAGATAATCATGATTGTTTGGAACAAAACTCCCACAAGACATTACATTGCCACAACAGACATTGTGGCCCCGTCAGTCATGATGAAGCATCACTTGTTTCTCCCTGCCGGTTCAATGATTTTGAAATTGCTGAAGATCATAATCTCCGAAAGACAATAAGATGCAATCACGAAATTGAGCATCAAAGTCCATGGCCTCTATCTGACTTTCAGGTCTGCGGGGATGATCATATTGCATGCAATCATGAAATTAAGCACGCGGAATCGCATGATTTTGGGAGTTGTGAAGAGCAAGAAAAAGATTCTTGTTGCAAAGGTTGTCCAGACGAATGTAACGAATGTCCTGTTGTGTGTGTGCACCCGTGTTCAAATGAGATAGAAGCTGGTGCATGTTGTGAGGGCTCTTCAAAGAAATCCATTGAGTTTCCAATGGCTCATGCTTGTATTAGTTTTCACAAGAGAGATATTGGTGGGTGTTGCAAGAGCTACATGAAGGAATGCTGTAGCAAGCATGGACATTTCGGGGTGGGTTTTGGAGGTTTATCCGAAATTATTACAGAACAGGTGTAG 3213 0.4426 MTTEKDGARKMKKSYFDVVGLCCSSEVPMIENILKPLEGIKEVSVIVPSRTVIVIHDTLLISEFQIAKALNQARMEASVRVYGDEKEKEKKKWPSPYAMASGILLVVSLFKYVYVPLEYVALGAVAAGVIPILLKALSSLRHLRLDINILILIAVAGTIAMHDYVEAATIVFLFSVAEWLESRASHRASAAMSSLMNIAPQKATIAETREIVDADEVKVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYISVKTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDKFAKFYTPAVVIISTLVAVIPVLLRVHNAKHWFRFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLIIKGGDYLETLAKVKVMAFDKTGTITKGEFMVTNFLSLCHDVDLKTLIYRVSSVESKSSHPLAAAIIDYGKSLSIDPKPEEVTDYENFPGEGIRGKIDGRYVYIGNRKIATRAESKTVPTLEGGSQGGKTIGYIYSEATPIGVFSLSDVCRSGVVEAIGQLKLLGIKTSMLTGDSHAAAMQAQEQLGHALEEVHAELLPEGKAKIITEFKKEGSTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPQAIKLARIARRKVIENIILSVVTKAAIIGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLHSREKHRGKCCRPSTQLHLHKSGCHVNDGKSSHPRHHHDHRHHHHQHKHDTHQHSKIIESHDKCKSSDEIHEPNLCHHGRCEKGNVQSHDAESKNCSSSQDRLMIRADKCTTSTDSHGSCLEHGNSHSTSSCLKGNCDPISHDGVSLSSPCHFMHSHDIESQACSVSSHAILTGANKCSSSIDNHDCLEQNSHKTLHCHNRHCGPVSHDEASLVSPCRFNDFEIAEDHNLRKTIRCNHEIEHQSPWPLSDFQVCGDDHIACNHEIKHAESHDFGSCEEQEKDSCCKGCPDECNECPVVCVHPCSNEIEAGACCEGSSKKSIEFPMAHACISFHKRDIGGCCKSYMKECCSKHGHFGVGFGGLSEIITEQV 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0906 1070 SUPERFAMILY HAD-like 395 697 IPR036412 -
Lele21g0906 1070 Gene3D - 387 647 IPR023214 -
Lele21g0906 1070 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 147 487 - -
Lele21g0906 1070 Gene3D - 407 528 IPR023299 GO:0000166
Lele21g0906 1070 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 170 674 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g0906 1070 CDD P-type_ATPase_HM 98 698 - -
Lele21g0906 1070 FunFam Putative cadmium/zinc-transporting ATPase 3 8 81 - -
Lele21g0906 1070 Pfam haloacid dehalogenase-like hydrolase 392 610 - -
Lele21g0906 1070 FunFam Copper-transporting ATPase 1, putative 185 299 - -
Lele21g0906 1070 MobiDBLite consensus disorder prediction 734 751 - -
Lele21g0906 1070 ProSitePatterns E1-E2 ATPases phosphorylation site. 398 404 IPR018303 -
Lele21g0906 1070 Pfam E1-E2 ATPase 206 374 - -
Lele21g0906 1070 FunFam Putative cadmium/zinc-transporting ATPase 3 407 528 - -
Lele21g0906 1070 SFLD p-type atpase 378 647 IPR044492 -
Lele21g0906 1070 PRINTS H+-transporting ATPase (proton pump) signature 628 653 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g0906 1070 PRINTS H+-transporting ATPase (proton pump) signature 569 585 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g0906 1070 PRINTS H+-transporting ATPase (proton pump) signature 596 612 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g0906 1070 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872
Lele21g0906 1070 SFLD C1.7: P-type atpase like 378 647 - -
Lele21g0906 1070 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 147 699 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele21g0906 1070 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 495 IPR023298 -
Lele21g0906 1070 Gene3D - 184 299 - -
Lele21g0906 1070 SUPERFAMILY Calcium ATPase, transduction domain A 208 295 IPR008250 -
Lele21g0906 1070 Gene3D - 8 81 - -
Lele21g0906 1070 SUPERFAMILY HMA, heavy metal-associated domain 10 79 IPR036163 GO:0046872
Lele21g0906 1070 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 9 701 - -
Lele21g0906 1070 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Lele21g0906 1070 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Lele21g0906 1070 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Lele21g0906 1070 PRINTS P-type cation-transporting ATPase superfamily signature 396 410 - -
Lele21g0906 1070 PRINTS P-type cation-transporting ATPase superfamily signature 620 632 - -
Lele21g0906 1070 MobiDBLite consensus disorder prediction 726 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0906 Lele-ChrLele21 6151844 6160573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0906 8 715 Primary Pumps ATPases AT4G30110 68.547 0.0 1024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0906 21 6151844 6160573 Lele17g0713 17 18874016 18875837 CCT
Lele21g0906 21 6151844 6160573 Lele18g0809 18 5083798 5085433 CCT
Lele21g0906 21 6151844 6160573 Lele19g0844 19 5109224 5110340 CCT
Lele21g0906 21 6151844 6160573 Lele20g0614 20 13445502 13447118 CCT
Lele21g0906 21 6151844 6160573 Lele21g0906 21 6151844 6160573 ECH
Lele21g0906 21 6151844 6160573 Lele24g0882 24 6077771 6085217 hybridization