Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0899 ATGGAGGAAAAAACAGTGTTCCTGACGAAGCCTTTCTCATTAGGAGACACGGATACGGCTTATAAGGCACCTAATCTCTTGCAACGTATATTAAGCCTATTTAAAAATATACGGCCTGGATCTGATCTCTCTCACTTCCAACTACCGCCTCTGTTTAATTTTCCAAAGTCACAACTTCAGTGCTATGGTGAGTCTGTATACTGCACATCTTCAGACTTGCTAGGCAAATGCAACAGAGAGAAGAATCCAGTGGATAGGTTCACATCAGTGGTTGCATGGTGCATCTCTACTACTCGCCCTACTCTTTTACTTGCTCCTTATAACCCCGTTCTTGGAGAGACCCACCATGCTTCAAGGGGAAATCTCAACGTCCTCCTTGAACAGGTTTCACACCATCCTCCCGTATCTGCCCTGCATGCAACTGATGAGAAAGAGAACATAGAGATGACATGGTGCCAACAGCCTAGTCCACAGTTTTATGGCACTTCGGTGGAGACTCAAGTTCTTGGTAAACGGCAACTGAAGCTCCTGAATCATGGAGAAACATATGAAATGAATTGTCCTCACCTCCTAATCAGACTTCTTCCGGTCCCTGATGTTGATTGGGTTGGAAATGTTAATATCCAGTGTCTAGAGACTGGTCTGGTGGCGGAGCTAAGCTACAAAGGTAATTCTTTTCTAGGATTTGGGGGGAACTGTAGATTGATCAAAGGAAAGATCCTCAATTCATCGTCATCAAAAGTTCTTTATGAAGTGGATGGTCATTGGGATAGAACTGTGACTATAAAGGACACAAGTAATAAGAAGGTTGAAGTGATATATGATGCAAATGAAGTCATTTCAGGGCTCCAAGCTCCAATCGTCCGCGATCCAAAGAGTGTGAAGCCAACGGAGTCAGCCGTGGTTTGGAGTGAGGTTAGCGAAGCCATAATGAACAAAGAATGGGAGAAAGCGAGAGAAGCAAAGAAAGCTGTGGAGGAAAGACAGAGGAAAGTGAAGAGAGAAAGAGAGTCAAGAGGAGAAAATTGGATTCCTAAACATTTTGTTGTGTTTAATAGCAAAGAAGGTGGCTGGGAATGCTCACCCATTGAGAAGTGGGTCTCCTCTGCCCCCATTGTTGGCCTGTAA 1128 0.4424 MEEKTVFLTKPFSLGDTDTAYKAPNLLQRILSLFKNIRPGSDLSHFQLPPLFNFPKSQLQCYGESVYCTSSDLLGKCNREKNPVDRFTSVVAWCISTTRPTLLLAPYNPVLGETHHASRGNLNVLLEQVSHHPPVSALHATDEKENIEMTWCQQPSPQFYGTSVETQVLGKRQLKLLNHGETYEMNCPHLLIRLLPVPDVDWVGNVNIQCLETGLVAELSYKGNSFLGFGGNCRLIKGKILNSSSSKVLYEVDGHWDRTVTIKDTSNKKVEVIYDANEVISGLQAPIVRDPKSVKPTESAVVWSEVSEAIMNKEWEKAREAKKAVEERQRKVKRERESRGENWIPKHFVVFNSKEGGWECSPIEKWVSSAPIVGL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0899 375 Gene3D - 110 290 - -
Lele21g0899 375 Coils Coil 318 338 - -
Lele21g0899 375 Pfam Oxysterol-binding protein 34 305 IPR000648 GO:0008289
Lele21g0899 375 FunFam Oxysterol-binding protein-related protein 4B 295 367 - -
Lele21g0899 375 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 30 354 IPR000648 GO:0008289
Lele21g0899 375 SUPERFAMILY Oxysterol-binding protein-like 28 360 IPR037239 -
Lele21g0899 375 ProSitePatterns Oxysterol-binding protein family signature. 127 137 IPR018494 -
Lele21g0899 375 FunFam Oxysterol-binding protein-related protein 4C 110 287 - -
Lele21g0899 375 Gene3D - 295 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0899 Lele-ChrLele21 6058067 6061906 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0899 21 6058067 6061906 Lele17g0548 17 17636307 17640305 CCT
Lele21g0899 21 6058067 6061906 Lele19g0990 19 6256809 6266229 CCT
Lele21g0899 21 6058067 6061906 Lele20g0454 20 12228118 12231715 CCT
Lele17g0534 17 17506586 17509042 Lele21g0899 21 6058067 6061906 CCT
Lele21g0899 21 6058067 6061906 Lele23g1152 23 17058979 17063012 hybridization
Lele21g0899 21 6058067 6061906 Lele24g0873 24 5993335 5997321 hybridization