Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0883 ATGGAAGACGAAGATAGAGCATGCAACACAGGGCTGTATCTGGGGCTGGGGACAGGAGGGTATGTGCCGAAGAAGAAGAAGAAGGAGATCATTGAGAACAATAACCAAGTGGGTCCTCGCTTGGACCTACCCTTTGAACTTTTTCCCAGAGGATCAGAAGAAACCCTGAATACTACTACGGATCATCAACAACAAGGTGGATTGTTCAGAAAGAAACTGAGGCTCACAAAGGATCAATCTTCGTTGCTTGAAGAAAGCTTCAAGCTACATACCACGCTTAATCCTGCTCAGAAACATTCTCTTGTTGAGAAATTGAATCTGAGACCAAGACAGGTCGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAGAGAGAGCGAGAGTGCGAGTTGTTGAGGAAATGCACTGAGAATCTGAGAGATGAGAATCGAAGGTTGAAGAAAGAGTTGCAGGAGTTACGTGCACACAAGGTTGGGGCGACGGCGGCGACTTCGCCGTTGTTCATTCAACTCTCAAAGACGACGGCGGCGTGTTCATCATGCCAGAAACCATTCAAAGCGAATGACGCAAATATCAATAACAGTAGGAAGCATAAATTGGAGAGCGTGGCCTTAGATTGCTCTGTGGGGTAA 642 0.4642 MEDEDRACNTGLYLGLGTGGYVPKKKKKEIIENNNQVGPRLDLPFELFPRGSEETLNTTTDHQQQGGLFRKKLRLTKDQSSLLEESFKLHTTLNPAQKHSLVEKLNLRPRQVEVWFQNRRARTKLKQRERECELLRKCTENLRDENRRLKKELQELRAHKVGATAATSPLFIQLSKTTAACSSCQKPFKANDANINNSRKHKLESVALDCSVG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0883 213 Coils Coil 125 166 - -
Lele21g0883 213 Pfam Homeodomain 70 124 IPR001356 GO:0003677
Lele21g0883 213 SMART halz 126 169 IPR003106 GO:0006355|GO:0043565
Lele21g0883 213 SMART HOX_1 68 130 IPR001356 GO:0003677
Lele21g0883 213 CDD homeodomain 70 127 IPR001356 GO:0003677
Lele21g0883 213 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981|GO:0006355
Lele21g0883 213 Gene3D - 76 122 - -
Lele21g0883 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 59 193 - -
Lele21g0883 213 SUPERFAMILY Homeodomain-like 54 128 IPR009057 -
Lele21g0883 213 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0883 Lele-ChrLele21 5911190 5912047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0883 58 186 Homeobox Transcription Factor Family AT4G37790 58.015 1.07e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele21g0883 Homeodomain 3.3e-14 CL0123