Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0881 ATGGCAATTGCAGCTTCAACCTCATCCTCCACCATGAGGATCACCCATAGCCACAACAACCTGGATGACAACGAGAGGAGTAAGCCGACGCCATCGGCAGAGGCAGATGACGGAGGCAGCGACGACGGTCACGAGCAGGACGTGATCATGCCTGGGTTTCGCTTCCACCCAACTGAAGAAGAACTGATCGAGTTCTACCTTCGCCGTAAGGTTGAGGGCAAGCCTTTCAATGTTGAGCTCATTACTTTCCTAGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATTGGGGAGAAGGAATGGTACTTCTATGTGCCGAGAGATAGGAAGTATCGGAACGGTGATCGGCCTAACAGGGTGACGACTTCTGGGTATTGGAAGGCCACTGGAGCTGATAGAATGATCAAAACAGATGGTCTCAGATCCATCGGACTCAAGAAAACCCTAGTCTTTTATTCCGGTAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGAACGAGTATCGCTTGCCCCACCACGAAACCGAACGATTTCAAAAGGCCGAGGTATCTCTTTGTCGAGTGTACAAGAGAGCAGGAGTAGACGATCATCCCTCTCTGCCTCGTTATCTTCCGATAACATCCTCATCACCAAGAGCTTCAATATCACACAGCAAGCACAACGTCAACCAGTTAATGGCTCATCATCAGAACATCAGATTCCTGGGACAACAACAATCACATCATGATCAATATCAGACGACCACGAACCAAGTTGTCGATAAAATGAATCCTCAAACTGAGCAAAACAGTATTACTACTGATCATGCCAACAAGTACAACAACAACAACAATCTGGATCATCATCATCAGGACGAAGGCTTAATGCTCGTGCAGCAACCAACAAAGCAACAAGTACATACAGAAGCAGTAGCCTCCTCTTTCTTCCGCGAAGGCTCCACTACTTCAAATTCTTCCTCTTTACCATCTAATGAAAATATTAATACTGCAATTATGGTGGATGATCATCTCAATCGGCTAGTGAGTTATAATCAGCAGTTTCAGTTCTACAATAACATTTATGCCCCTTCACCTTCTTCTCAAAGTCATCAGCAATATCAGCCCTACATGCAGCTCTCTAACATTCTGTTGCAGCCATCACAGCAATCAACGTCATCAATGGCTCTTAATAATTCGCTTCCACCAAACTCTTTTTCTGACAGACTGTGGGAGTGGAATCCAATAATCCCTGACCCAGCAAACCGAGACTTCACCGGCAATATGTCGTCCTTCAAGTAA 1293 0.4586 MAIAASTSSSTMRITHSHNNLDDNERSKPTPSAEADDGGSDDGHEQDVIMPGFRFHPTEEELIEFYLRRKVEGKPFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGLRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETERFQKAEVSLCRVYKRAGVDDHPSLPRYLPITSSSPRASISHSKHNVNQLMAHHQNIRFLGQQQSHHDQYQTTTNQVVDKMNPQTEQNSITTDHANKYNNNNNLDHHHQDEGLMLVQQPTKQQVHTEAVASSFFREGSTTSNSSSLPSNENINTAIMVDDHLNRLVSYNQQFQFYNNIYAPSPSSQSHQQYQPYMQLSNILLQPSQQSTSSMALNNSLPPNSFSDRLWEWNPIIPDPANRDFTGNMSSFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0881 430 MobiDBLite consensus disorder prediction 18 49 - -
Lele21g0881 430 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
Lele21g0881 430 MobiDBLite consensus disorder prediction 1 17 - -
Lele21g0881 430 MobiDBLite consensus disorder prediction 1 49 - -
Lele21g0881 430 SUPERFAMILY NAC domain 47 195 IPR036093 GO:0003677|GO:0006355
Lele21g0881 430 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 47 302 - -
Lele21g0881 430 FunFam NAC domain-containing protein 35 58 199 - -
Lele21g0881 430 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Lele21g0881 430 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0881 Lele-ChrLele21 5893768 5895967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0881 1 209 NAC Transcription Factor Family AT2G02450 71.689 2.42e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele21g0881 NAM 3.4e-34 No_clan