Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0878 ATGGCTGTAGATCTGGTAGTCCTTCCCAGGAAGATGGAAGAACAGATGGCTATTCAAGAAGCTGCTTCCGCTGGATTGAAGAGCATGGAACTTCTTATTCGTCTTCTTAATTCTTCTCCATCTCAGGCCGTTTCTAATAATCATCCCCAACGCCTTGACTGTGCCCAACTCACCGATTTGACCGTTTCCAAGTTTAAGCAAGTCATCAACTTACTCAATCGCACCGGTCACGCTCGCTTCCGTCGTGCTCCTTCCACCACTAATCCTAATCCTCCCTCCTCGTCTTCTTCTGGTCTTCCTAATCCCACCAAATCTAACCACTCTCAGGGCTTGAGCCTTGATTTTGCCAATCCCTGTAAGGTTAAGACGTCGCCGATTAAACCGTCGACTGAGTTGCCCGTGTCTCAGTACTCCAAGGACACTTTTAGTATCTCCCCTCCCATGTCCGCAACTAGCTCCTCCTTTATGTCTTCTATCACCGGAGACGGCAGCGTTTCGGACGGAAAAATAGGCCCCTCGCTGCTTACTCCAGCCGCTCCCGTCGTCTCCTCCGGTAAACCCCCCCTCTCCTCATCTCACCGGAAAAGGTGTCACGGCTCTGCCTTCTCTGAGAAAATGTCATCCTCCGGTCACTGCCATTGTTCTAAGAGAAGGAAATCGCGAGTTAAAAAGACGATCCGTGTGCCGGCGATAAGCTGTAAGATCGCCGATATTCCGCCGGACGAGTATTCCTGGAGAAATGGCTATTACAAGTGCAGCACTGTGAGAGGATGCCCGGCGAGAAAGCATGTGGAGCGAGCTCAAGACGATCCCAAGATGTTGATCGTGACATACGAAGGCGAGCACCGTCACGCTCTGGAAGTGCGTGCGGCGGAGTGCGGTGGTGCAGGCATCGGTCTTAGCTTCCAAGCCAGCTAA 918 0.5196 MAVDLVVLPRKMEEQMAIQEAASAGLKSMELLIRLLNSSPSQAVSNNHPQRLDCAQLTDLTVSKFKQVINLLNRTGHARFRRAPSTTNPNPPSSSSSGLPNPTKSNHSQGLSLDFANPCKVKTSPIKPSTELPVSQYSKDTFSISPPMSATSSSFMSSITGDGSVSDGKIGPSLLTPAAPVVSSGKPPLSSSHRKRCHGSAFSEKMSSSGHCHCSKRRKSRVKKTIRVPAISCKIADIPPDEYSWRNGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALEVRAAECGGAGIGLSFQAS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0878 305 Pfam Plant zinc cluster domain 194 237 IPR018872 -
Lele21g0878 305 ProSiteProfiles WRKY domain profile. 248 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g0878 305 MobiDBLite consensus disorder prediction 177 196 - -
Lele21g0878 305 Gene3D WRKY domain 231 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g0878 305 SMART WRKY_cls 239 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g0878 305 SUPERFAMILY WRKY DNA-binding domain 237 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele21g0878 305 Pfam WRKY DNA -binding domain 248 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele21g0878 305 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 287 IPR044810 GO:0003700
Lele21g0878 305 MobiDBLite consensus disorder prediction 80 113 - -
Lele21g0878 305 MobiDBLite consensus disorder prediction 76 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0878 Lele-ChrLele21 5870495 5871722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0878 1 284 WRKY Transcription Factor Family AT2G24570 51.090 3.38e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele21g0878 Plant_zn_clust 2.9e-16 No_clan