Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0867 ATGGAGAATATCGGCGAAGAGTATAATCATTACTGGGAAACCAACAGTTGGGGATGGGACGAGGCCTTCTCCGGTTGCTATGATTCCAGCTCCCCCGACGGCGCTGCCTCCAAGAACATTGTCTCCGAGCGAAACCGCCGCAAGAAGCTCAACGAGAGACTCTTCGCTCTCAGAGCCGTCGTCCCCAACATTAGCAAGATGGACAAGGCTTCCATAATTAAGGACGCAATCGATTACATCCAGCACTTGCATGAACAGGAGAGGAATATCGAGGCGGAGATTTCGAAGCTTGAATCTGGGAAGCAGATGAAGCAGAACTCAAGTGATATGGATTACGAGCAAGACCTCCCCGTCTTGCTCCGGTCCAAGAAGAAGAAAACAGAGCAGCAGCTTTACGATTCCGTCATCAGTTCAAGAAATTCCCCGATCGAAGTCCATGAGCTAAAAGTAACATACATGGGAGAGAAGACGTTCGTCGTGAGTTTGACGTGTAGTAAAAGGACAAACACAATGGTGAAACTGTGCGAAGTGTTCGAATCTCTGAAGCTGAAGATCTTGACGGCCACGATAACTTGTTTCTCAGGCAGGCTCGTAAAGACAGTCTTCGTAGAGGCAGACGAAGAAGAGAAAGATCTCTTGGAGATAAAAATCCAAACGGCCATTGCAGCTCTTAATGATCCTGATAGCCCTTTGAGCATCTAA 702 0.4786 MENIGEEYNHYWETNSWGWDEAFSGCYDSSSPDGAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQHLHEQERNIEAEISKLESGKQMKQNSSDMDYEQDLPVLLRSKKKKTEQQLYDSVISSRNSPIEVHELKVTYMGEKTFVVSLTCSKRTNTMVKLCEVFESLKLKILTATITCFSGRLVKTVFVEADEEEKDLLEIKIQTAIAALNDPDSPLSI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0867 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 99 IPR036638 GO:0046983
Lele21g0867 233 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 31 102 - -
Lele21g0867 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 83 IPR011598 GO:0046983
Lele21g0867 233 Coils Coil 80 100 - -
Lele21g0867 233 Gene3D - 29 100 IPR036638 GO:0046983
Lele21g0867 233 Pfam Helix-loop-helix DNA-binding domain 41 84 IPR011598 GO:0046983
Lele21g0867 233 Coils Coil 203 223 - -
Lele21g0867 233 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 33 218 - -
Lele21g0867 233 SMART finulus 40 89 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0867 Lele-ChrLele21 5744837 5751135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0867 1 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 59.545 1.70e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele21g0867 HLH 4.4e-12 No_clan