Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0858 ATGGAACCCGGGGCCCCTCCTCCAACCACCCTCCTCGGCAAATACCAATTGACGGATTCGCTCGGTCGTGGAAGCTTTGCTAAGGTTTATCGTGGACAATCTTTGGCCGATGGCTCCACCGTCGCCGTTAAGATCATCAATAAGCATAAAATCATTGAGTCTTCTCTGGAAGACAGGATTCTTAGCGAAGTCAACGCAATGCATCGCCTCCATGAACATCCGAACATCCTCAAAATCTACGAAGTCATGGCCACAAAATCCAAAATCTTTCTTATCATTGAGTATGCACCCGGCGGCGACCTCTCCTCTAAAATCATAAGGGCGGGCCATTTTAAAGAGAAGTTAGCTCGCCGTTACTTCCAGCAACTAGTCTCCGCTCTGTGTTTCTGTCATCGGAACGGCGTGGCTCACCGTGACATCAAGCCTCAGAACCTTCTCTTGGATAAAGACGGCAACTTAAAAGTCTCCGATTTCGGGCTTTCCGCTTTATCGGAAAACCTTCGAGACCATTTGCTCCGCACAGCTTGCGGTACTCCGGTATTCACCGCCCCGGAGATACTCCGGCATCAAAGTTACTCCGGCCCCAAAGCCGATGCGTGGTCTTGCGGGCTCGTGCTATACGTCATGCTCACCGGATGTCTCCCGTTCAATGACTACTATAACATCCCGGCGATGTGCAGGAAGATTGGCATGCGCGATTATAAATTTCCAGACTGGGTTTCAAAGCCGGCTCGCGGAGTTATCTACGGTCTACTTGAGCCGAATCCGTTGAAGAGGACAAGCCTTGAATCGCTGTATGAGGTAACGTGGTTCAAGAAATCACTAAAACCAGAAATTGAAAGGAGTGCGTTCAGATCAGGATGGGATTTGTGTGCTCAATCTGAGGCTGGCTTGAATGCTTTTGATATAATATCAATGTCTAGGGGTTTGGATTTGAGACCTCTATTTGAAACGAGGTTGGAGAAGAGGTTCACGTCGAACGTGAAAAGGGAGGTGGTGTCGGAGAAAGTGAAAGAAATTGGGGTGGGTTTAGGGTTTAAGATTGAAGAAGGGAAGAATGGTTTAATTGGAATGGGGAAAGAGAGAGTGGTTATAATCGTTGAAGTGTTTGAGATTGTGGAAGATTTGTTGGTGGTGACTCTGAAAGTGGATGAAGGTGGTTTAGATTTTGAGGAAAATTACTGGAAAGATTGGAAAGTTGGACTTGAAGCCCTTGTTCCTTCTTGGCTCGACGAAGAAAAGCAACGGGAATGA 1254 0.4745 MEPGAPPPTTLLGKYQLTDSLGRGSFAKVYRGQSLADGSTVAVKIINKHKIIESSLEDRILSEVNAMHRLHEHPNILKIYEVMATKSKIFLIIEYAPGGDLSSKIIRAGHFKEKLARRYFQQLVSALCFCHRNGVAHRDIKPQNLLLDKDGNLKVSDFGLSALSENLRDHLLRTACGTPVFTAPEILRHQSYSGPKADAWSCGLVLYVMLTGCLPFNDYYNIPAMCRKIGMRDYKFPDWVSKPARGVIYGLLEPNPLKRTSLESLYEVTWFKKSLKPEIERSAFRSGWDLCAQSEAGLNAFDIISMSRGLDLRPLFETRLEKRFTSNVKREVVSEKVKEIGVGLGFKIEEGKNGLIGMGKERVVIIVEVFEIVEDLLVVTLKVDEGGLDFEENYWKDWKVGLEALVPSWLDEEKQRE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0858 417 Pfam NAF domain 298 349 IPR004041 GO:0007165
Lele21g0858 417 SMART serkin_6 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0858 417 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Lele21g0858 417 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele21g0858 417 CDD CIPK_C 299 402 - -
Lele21g0858 417 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 382 - -
Lele21g0858 417 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0858 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lele21g0858 417 FunFam Non-specific serine/threonine protein kinase 5 97 - -
Lele21g0858 417 Gene3D Transferase(Phosphotransferase) domain 1 8 299 - -
Lele21g0858 417 FunFam Maternal embryonic leucine zipper kinase 8 287 - -
Lele21g0858 417 ProSiteProfiles Protein kinase domain profile. 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0858 417 CDD STKc_AMPK-like 14 263 - -
Lele21g0858 417 Gene3D Kinase associated domain 1, KA1 300 407 - -
Lele21g0858 417 SUPERFAMILY Protein kinase-like (PK-like) 12 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0858 Lele-ChrLele21 5668849 5670102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0858 9 409 CBL-interacting serine-threonine protein kinases AT4G14580 54.258 2.04e-141 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele21g0858 Pkinase 1.2e-66 CL0016