Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0847 ATGGGTTTGAGATCGATATTTGGATGTTGCTTTAAGGGGGAGGTTCAGGCGGCGGTGCCGGCTTCGACGGCCAAGGTGGTGGCCACTAAGCAGAGTGCGTACAATTGGGTTTCCGTGTCAGATTTGAGCAATCCGATCAGCGCGTCGCTGACGGAGGATCTGTCGGTGTCGCTCGCCGGATCGAATCTGTATGTGTTTACTCTGGCGGAGATGAAGCTCATCACTCAGGGATTCTCCTCCGGTAACTTTCTCGGAGAAGGTGGGTTCGGACCGGTGCATAAGGGCTTCATCGACGACAAGCTCCGGCCGGGTCTTAAGGCTCAGACCGTCGCCGTTAAGCTCTTGAACTTGGACGGGGCTCAGGGCCACAAGGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTAAGACATTCACACCTTGTGAAACTGATTGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTCTATGAATATCTTCCCAGAGGCAGCTTAGAGAATCAACTCTTCAGAAGATACTCAGTCTCATTGCCATGGTCTACAAGAATGAAAATCGCAGCCGGAGCTGCAAAGGGTCTTGCCTTTCTTCACGAAGCAGCTAAACCCGTTATCTACAGAGACTTCAAAGCTTCAAACATCTTATTAGACTCAGATTACAACGCAAAGCTATCTGATTTCGGGTTGGCGAAAGATGGTCCTGAGGGAGACGACACGCATGTGTCGACGCGAGTCTTGGGTACTCAGGGCTACGCGGCTCCCGAGTATGTGATGACGGGTCACTTGACCTCGAAGAGTGATATTTATAGTTTTGGAGTAGTTCTATTAGAGCTTCTAACAGGAAGAAGATCAGTGGACAAAACTCGGCCGTCGAGAGAACAAAACCTAGTGGAATGGGCAAGGCCAATTCTGAACGATCCAAGGAAGCTAGGCAGAATCATGGATCCAAGACTTGAAGGTCAATACTCTGAGATGGGTGCAGCCAAAGCTGCGGCATTGGCTTACCAGTGCTTGAGCCACAGGCCCAAGAACAGACCAACTATAAGCCAAGTGGTCAAGAACCTCGAGCCACTTCAGGACTTCGACGACGTCCCCATCGCGCCCTTCGTCTACACAGTTCCGGCCGACAATAGGAGTGACTCCAGGGAAAGCGGCGGCGAGCTACCGAGATCAGAAAGAAAGAATCATCACCGTCGCCACAGACACCCTCTCCGATCACCAACCTCGCCGCCGAATAAGTCTGAGAATAATTCATCACAGTCTAGGAATAATGGAAGCTCACCGTCAAGTGGAAGTGGGTCCAACTCACCTACTTCACATCATCACAACAAGGAGGCCAAGGGAACTTAA 1350 0.5089 MGLRSIFGCCFKGEVQAAVPASTAKVVATKQSAYNWVSVSDLSNPISASLTEDLSVSLAGSNLYVFTLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLNLDGAQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAAGAAKGLAFLHEAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVLGTQGYAAPEYVMTGHLTSKSDIYSFGVVLLELLTGRRSVDKTRPSREQNLVEWARPILNDPRKLGRIMDPRLEGQYSEMGAAKAAALAYQCLSHRPKNRPTISQVVKNLEPLQDFDDVPIAPFVYTVPADNRSDSRESGGELPRSERKNHHRRHRHPLRSPTSPPNKSENNSSQSRNNGSSPSSGSGSNSPTSHHHNKEAKGT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0847 449 PANTHER OS01G0588500 PROTEIN-RELATED 59 359 - -
Lele21g0847 449 MobiDBLite consensus disorder prediction 407 439 - -
Lele21g0847 449 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Lele21g0847 449 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0847 449 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Lele21g0847 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lele21g0847 449 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Lele21g0847 449 Gene3D Phosphorylase Kinase; domain 1 41 160 - -
Lele21g0847 449 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Lele21g0847 449 MobiDBLite consensus disorder prediction 375 449 - -
Lele21g0847 449 FunFam Probable serine/threonine-protein kinase PBL8 161 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0847 Lele-ChrLele21 5578555 5580525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0847 66 355 Glycoside Hydrolase AT3G07070 53.242 2.66e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele21g0847 PK_Tyr_Ser-Thr 8.3e-46 CL0016