Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0833 ATGCTCGTTCGCCGGCGAGGAGCGGTAGAATCAGCGGGGGAAGCAGGCTTATGTGCTTTAGGCGGTCCTTCTTTTTTTCTCGAGGCTCCGAGCACTGATGCTACGGCGGGTCCCGCCGAGAGGGAAAGGGAAGGTAGTTACATTGATGATGAATGGATTGTTTGTTGTTGTGGCTGGCCGAGAGCCACCACAGAGCCATCATTTTCGTGGCCTGCAGCTGCCTACACTTGGGGATATTCTATAGAATTATCTAGTTTCATACCCGTGAATGGTAACAACAGCACCTTCACCTTCACCTTCCTTCCTCTCCTCCTTCATCTACCTTTCAATCTCCATCAGCTTTCACGAATCCAGAACTGGAAAATGCTTACGTGCATAGCTCGTCCCCAGAAACCCGGGAATGACTCGCTGAGTCAGCCTGATGATTCCGATTCTAAAAACCAAGCCATCAAATCCCTTACTTCTCAGCTTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGGCCGCCCACGCAGACTCGGCTCCGGAGCAATATCGAGTCAGACACAGATTCGGATCGTTTCCGGTGGTCGTATCGGAGGACGGGGAGCTCAAGCTCGACGACGACGAGGACGTGGGGGAAGGAGATGGAGGCGAGGCTCAAGGGGATTTCGAGTGGAGAAGGGACGCCCAATTCGTCCAGTGGACGGCGAGTGGACCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTCTGATCACATTTGTTTCACTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGGTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGATTTAACCGCCAAGCTTTCCCTCTTCCAACGCCCCCAAGATCCGAAGATGAGAGCTCAAAGATGGAATCAGCGGAAGACAGCCCAGTGACACCTCCGCTAACTAGGGAACGTTTACCTCGTAATTTGCACCGTCCTACAGGAATGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAATCAATGCAATCCCGGCATCCCTATGACTCTTATGGTATGAACTCAACTCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAACTATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCCGAGAAGCTGATCGCTCCGGCGATTTTTCGATCAGCAATGCCAGCGATCTCGAGACTGAATGGGTTGAGCAGGATGAACCTGGAGTTTATATTACCATTAGAGCATTACCCGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAATTTTGGAGAGATGCATGCTAGATTATGGTGGGAAGATAACCGCGCCAGAATACATGAACAATACTTATTGGGTCTTTTCCTGCGGAACCTGCATGCTTCAAACATGAACAGAAGGGAGAGATCGATGCGAGATGAGTCGTACCCACGAAGCAGGAGGACCCCAACTTTCTCTTCCTCTCTTCTTGACGCCATTTACCGTTCTACTGACCAATCAAAATCTGATCTTGATGAAGATTCAAAATTGGGTCTCTGCAAGGAAGTTCGGTACACAACGAAACAGGCCAATCTCAGCCACAACAATAACAGCAGAGGAGTTTGTCTGGGAAATTATGAATATGGCAGAGTCAGGGATATGAATCATTGTCCTCGCCGAACAGTTATGGTTGAAGATTATCGGATGGAGAAACAGAGTTCCCACAGTTCTTCAGAGTGCTGCAGTTCAGGAGGATTCTTCTCGTCGTCGGAGACAGAGACGAGCTGTAAACAGAGATCGACGTTTACTAAATCCGACAAGAAAAAGAAACAGAAAGTGAAGCAGCCGATGTCACCGAGAAGTCGAATAGCTAACTTTTTGAGCTCTCTCTTCAACTACGGAAGCGTAAAGAAGGCGAAAATGTGCCACGTTGGGGCGGCGGAAGATGTTAATTTCGAGCAGAAATCTCAGTCTCCATCTGTTTCTTCCTCTGCTTCTTCATATAGGTCTTGCATGACCAAAACGCCATCTTCAGTGAAGAAGAACAATCACGTCAAGAGGTGCGTGAGATTTTACCCTGTAAGTATAATTCTGGACGAGGATTCTCATCACAAATATGTGTATGAGAATGATCCAGATATAATGCCTTTGCCTAGTGGTGTAGGAAAAACCACAAGAAGCTCTTCAGTGGATGAGAAGAAGAAGAAGAACTCTGTCATGGGCAGAGAAAATGCCTTAAGAAAGAGTGAGTTTGATTTCAGAGTGTTGTATAATCATAATGGTGAGGATGAAGAAGAAGAAGATGATGCTTTGAGCTATTCAAGTTCAGATCTATTTGAGTTGGATCACCTGACTGGAGCAGAGCTTCCGGTTTATGAAACTACTAATCTGGAAACATTTGTAAAATTCAATGTAATCAATTAA 2511 0.4755 MLVRRRGAVESAGEAGLCALGGPSFFLEAPSTDATAGPAEREREGSYIDDEWIVCCCGWPRATTEPSFSWPAAAYTWGYSIELSSFIPVNGNNSTFTFTFLPLLLHLPFNLHQLSRIQNWKMLTCIARPQKPGNDSLSQPDDSDSKNQAIKSLTSQLKDMALKASGAYKHCSPCTGPPTQTRLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVDPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKMESAEDSPVTPPLTRERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRHPYDSYGMNSTPKVSTISAAKTELSSMDASMRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSRENFGEMHARLWWEDNRARIHEQYLLGLFLRNLHASNMNRRERSMRDESYPRSRRTPTFSSSLLDAIYRSTDQSKSDLDEDSKLGLCKEVRYTTKQANLSHNNNSRGVCLGNYEYGRVRDMNHCPRRTVMVEDYRMEKQSSHSSSECCSSGGFFSSSETETSCKQRSTFTKSDKKKKQKVKQPMSPRSRIANFLSSLFNYGSVKKAKMCHVGAAEDVNFEQKSQSPSVSSSASSYRSCMTKTPSSVKKNNHVKRCVRFYPVSIILDEDSHHKYVYENDPDIMPLPSGVGKTTRSSSVDEKKKKNSVMGRENALRKSEFDFRVLYNHNGEDEEEEDDALSYSSSDLFELDHLTGAELPVYETTNLETFVKFNVIN 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0833 836 MobiDBLite consensus disorder prediction 627 648 - -
Lele21g0833 836 Pfam Transcription factor BRX N-terminal domain 148 174 IPR027988 -
Lele21g0833 836 ProSiteProfiles BRX domain profile. 253 308 IPR013591 -
Lele21g0833 836 MobiDBLite consensus disorder prediction 746 770 - -
Lele21g0833 836 MobiDBLite consensus disorder prediction 318 387 - -
Lele21g0833 836 Pfam Transcription factor regulating root and shoot growth via Pin3 431 486 IPR013591 -
Lele21g0833 836 Pfam Transcription factor regulating root and shoot growth via Pin3 253 307 IPR013591 -
Lele21g0833 836 MobiDBLite consensus disorder prediction 756 770 - -
Lele21g0833 836 MobiDBLite consensus disorder prediction 359 387 - -
Lele21g0833 836 MobiDBLite consensus disorder prediction 400 423 - -
Lele21g0833 836 PANTHER PROTEIN BREVIS RADIX-LIKE 1 122 487 IPR044532 -
Lele21g0833 836 ProSiteProfiles BRX domain profile. 432 487 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0833 Lele-ChrLele21 5476955 5491002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0833 362 512 Major Intrinsic Protein MIP AT1G31880 29.412 9.52e-14 72.0