Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0831 ATGCTGTACTACGGCCTGGCGGTTGTCGGAACCGCGGCCATAGTGTTAGCCATGTATAACCTCATCATCATCAGACGGTGCACCCGCAGCCGCCGGCACACGCGAGAGACGACAGGGGATGACCGGGCAGTGGAGGTGGTGATCGCGGCGGGAGGAAGTAGTAGCCGGAGCTTTGAGTGCTCGAACAGGAACATGCTAGCGAGCTTCAAGTATAAGAAAGAAGAAGGAGAGAAGGAGGAAGGAGGAGGAGGAGGAGTAAGAGGTGAGGAATATGAATGCCCAGTATGCTTATCGGTGTTAGAAGAAGGAGAAGAAGTGAGGAAGCTACCTCGCTGTAATCATTCGTTTCATGCGATTTGTATAGATATGTGGCTTTACTCTCACTTGGATTGCCCAATTTGTCGAACACCTGTTGGCATACCAGACTGA 429 0.5175 MLYYGLAVVGTAAIVLAMYNLIIIRRCTRSRRHTRETTGDDRAVEVVIAAGGSSSRSFECSNRNMLASFKYKKEEGEKEEGGGGGVRGEEYECPVCLSVLEEGEEVRKLPRCNHSFHAICIDMWLYSHLDCPICRTPVGIPD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0831 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 139 IPR013083 -
Lele21g0831 142 Pfam Ring finger domain 92 135 IPR001841 -
Lele21g0831 142 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Lele21g0831 142 FunFam RING-H2 finger protein ATL1 45 140 - -
Lele21g0831 142 SUPERFAMILY RING/U-box 92 141 - -
Lele21g0831 142 SMART ring_2 93 134 IPR001841 -
Lele21g0831 142 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 138 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0831 Lele-ChrLele21 5469327 5469755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0831 6 138 C3H Transcription Factor Family AT5G17600 36.691 9.31e-20 82.0