Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0824 ATGGGAAGAATCCCTTGTTGCTCCAAGGAGGGCTTGAACAGAGGTGCCTGGACCGCTCATGAAGACAAGATCCTCAGAGACTTCATCTCCGTCCACGGCGAAGGACGGTGGCGCAACCTCCCCAAGCGAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTCCGATGGCTAAACTATCTCAGACCAGATATCAAGAGAGGAAATATTACTCCTGACGAAGAAGACCTTATCATACGCCTTCACAAGCTCTTGGGAAACAGATGGTCTTTGATAGCCGGCAGGCTTCCAGGGCGAACAGACAATGAAATTAAGAATTACTGGAACACGAATTTAGGTAAGAAAGTGAAGCATAATCCTCGTCATCACCACATCAATCTCGCTTCCTCTGGTAGATTCTCTGCTCAATCTAAGAGCGACAAAACTTCCAACAATAATAATCCTCCGAATCTCAGACCAAAATCAAACTCCTTGGCTACTCCTCCAGATTCCAAGCTCAATAATAATGTTGTCCGTACAAAAGCCACCAAGTGCTCTAAGGTCGTCATCACCTCAGGTCCTCCTTCTTCCAGGCAGATTATGAGCAGATCTGAAGTTGCTGACCGGTTTCGACCGGTGGATGTTGCGGCTGACAGTGACCAGAGGACGGAATTGCTCAACGCCGATGATAATAACACGTCATTGAGCGCGGGGAACGATCATCATCATGATCACCAGGAGCCATTGTCTCACGCGGATTTGCTGGTGGATTTCAACGTGGGAGAGATCTGCTTGTCTGACCTTCTGAACTCAGATTTCTCAGATATGTTTGACTTCAGTAACAACAGCGTCGACCGCGGCTTGTCCCCGTCGTCGGACCAACCCTTAGTGTTCTCCGATGAGATTCTGAACGATTGGACGCAGAGAAGCGCGCAAGAGACAAATATGGGCAATAATCTTCACTCCTTCACATCCTTCCTGGAATCCAGCGAGGAATGGCTGGCAGAGTAA 990 0.4838 MGRIPCCSKEGLNRGAWTAHEDKILRDFISVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKHNPRHHHINLASSGRFSAQSKSDKTSNNNNPPNLRPKSNSLATPPDSKLNNNVVRTKATKCSKVVITSGPPSSRQIMSRSEVADRFRPVDVAADSDQRTELLNADDNNTSLSAGNDHHHDHQEPLSHADLLVDFNVGEICLSDLLNSDFSDMFDFSNNSVDRGLSPSSDQPLVFSDEILNDWTQRSAQETNMGNNLHSFTSFLESSEEWLAE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0824 329 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele21g0824 329 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele21g0824 329 FunFam MYB-related transcription factor 13 66 - -
Lele21g0824 329 Gene3D - 14 66 - -
Lele21g0824 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele21g0824 329 Gene3D - 71 147 - -
Lele21g0824 329 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele21g0824 329 CDD SANT 71 112 IPR001005 -
Lele21g0824 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele21g0824 329 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele21g0824 329 MobiDBLite consensus disorder prediction 129 171 - -
Lele21g0824 329 MobiDBLite consensus disorder prediction 209 239 - -
Lele21g0824 329 FunFam Transcription factor TT2 70 147 - -
Lele21g0824 329 CDD SANT 16 61 IPR001005 -
Lele21g0824 329 SMART sant 66 114 IPR001005 -
Lele21g0824 329 SMART sant 13 63 IPR001005 -
Lele21g0824 329 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele21g0824 329 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0824 Lele-ChrLele21 5412220 5413395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0824 5 116 MYB Transcription Factor Family AT3G13540 76.786 6.96e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g0824 Myb_DNA-binding 8.8e-13 CL0123