Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0821 ATGCTGGTAGCGCTTAGCCCTTTGGAGAAGAAACAAGAAGGAAGGGCATTGAGACAAGAGCCTGACACAGACGCAGCTGCTTCCGCTGCTGCTGCAGCAAACCTGCAGAAGCAGTATCATCAGAGAGTGTTCTCATTTAAGCCAGAGGATCCGTTTCTTTTGTTGCTTCTTCTTCTTCCTTCAACCCCCACTCTCCTCTGGTTGATGATGAACGGAGGAGGGAGAAGTAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTGTTTTCAAGTACATGGCTTCTGGTATTCCTATTCCTCCTGATCTTGTCTTCTCCATCAAAAGGGCTTCTTTAGATCACTCTCCTCTCTCTTTAAGGCTCTTGTCTCTCCCACCTCATCACAACTTTGAGTGGAACAACTTGGAGATGGGGTTGGGAAGGAAGATAGATACAGAACCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGAGGTGTTCTAAAGAAGCTTACCCAAATTCTAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTACAGCAACAAGGTTTCAAAACATCGTTAACCCCACCTACCAACAACACAGATTCCTCAACAGTCACAAAAAGTAACAGCACTCCTCATCCTTCACTCTCCCTCACTACTGCCACTCATTCATCATCTTCATCCCACCACAATCCTCATTCCTTCCTCTATAACAATCACCAACCTTCATCAAGATCTTCTTCATCTGGTTTCAGCTTCTCATTACAAGATGATACTGCTTCTATCTTGAATAGTGGTTATGTTTATGATGGGCTGAAGGAAGAGGTGGACGAGCATGATTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCGTGGCAACTCACGCCACTGTCAATGAACTCATCGTCTTCTTCCTCGAAGCAGAGGAGGTACTCTGGTTTGTCCATCGAGCACTCCTCTTACTTGGAGCTTCAAAACCAGGCGAACCAGCAAGATCAAGATTGCTACAACATGCTGGGATTGGGCAAATCAGAAGAACCTCAGAATCACAAAACTGTTCATCGTTTCTTCGATGAATGGCCCAACAAAAACAAAAGCTCGGCGTGGCTTGATCTGGACGATAAATCATCCACCACCCAGCTTTCAATTTCCATTCCCACCACCACCAATTCTGATCATCACGACCATTTTCCAGGCTTCAATTTCAGAACCCACCAAGAACTGGGTCGCGACGTTTTGAAACGACAACGGAACATATTGGGTGATGGTGCCCCTGCAAATTCATTACCTGGGCCCCTTTTGGATTCGCCAGAGACATTTCCTAGCAATTTGCAGAGTGAAAGTGGAAGTGCTAGTTTGATACTTTCTTCAAGCTGGAGGATGCCTATCAAATGGGTTTTGCACTGGCAGCCCAACGCAGGAACTATGGTGAATAGCCAAATTCTTAGTGAAGTTTCTCAGTGCGTTGAGAGCATCAATGGCGTCAAAGACGGAAGATGGAAAGCAACTCTAACATTCTATCGACCCAATTTACGAGACCAGTCCCTACAGGCCGAATTTCCGCGTGATTTTCTGGGGATATCGCTTCTTGAGCAACCTAACAAGTACTACTTCATAATTCGCAGCCAGAAGATCGTTCTTGAAGCAGATTCTTCGATTCTGACTATAATGGAGAAGCTGCAATCGTACAAGTCCAAGGTGGCACTCAATTTTGAGGGAGTGCTGTATAAATTGGGTGACTTTCAGCTGAAAGTTGGAAAATTTTCCCCCAATACTTCTGAAAGCCTGAGAGGAATTGTGATGGAGGTTGAGTATCTGCCCATTTCTTCTATAGAGAAATCCAGGCAAGTTATGGAAGAATTCCTTAATATATGGCGAGAAGCAGTGTCAAAAAAATCATTACCGGGTCAATTCATGCATGTGGAACCAAATTATGCAGAATATGGTCTCTCGGATAATTATACTTCGCAACATACAGCTGTTCAGCATGCAACTGCATTGGCCCAACTGTTTGCTACAGTGCAACAACAACCCGGACAGTCTATGAGGAATTAG 2106 0.4482 MLVALSPLEKKQEGRALRQEPDTDAAASAAAAANLQKQYHQRVFSFKPEDPFLLLLLLLPSTPTLLWLMMNGGGRSRFPFTPSQWQELEHQALVFKYMASGIPIPPDLVFSIKRASLDHSPLSLRLLSLPPHHNFEWNNLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQGFKTSLTPPTNNTDSSTVTKSNSTPHPSLSLTTATHSSSSSHHNPHSFLYNNHQPSSRSSSSGFSFSLQDDTASILNSGYVYDGLKEEVDEHDFFTEPSGTMRSFSASSMEDSSWQLTPLSMNSSSSSSKQRRYSGLSIEHSSYLELQNQANQQDQDCYNMLGLGKSEEPQNHKTVHRFFDEWPNKNKSSAWLDLDDKSSTTQLSISIPTTTNSDHHDHFPGFNFRTHQELGRDVLKRQRNILGDGAPANSLPGPLLDSPETFPSNLQSESGSASLILSSSWRMPIKWVLHWQPNAGTMVNSQILSEVSQCVESINGVKDGRWKATLTFYRPNLRDQSLQAEFPRDFLGISLLEQPNKYYFIIRSQKIVLEADSSILTIMEKLQSYKSKVALNFEGVLYKLGDFQLKVGKFSPNTSESLRGIVMEVEYLPISSIEKSRQVMEEFLNIWREAVSKKSLPGQFMHVEPNYAEYGLSDNYTSQHTAVQHATALAQLFATVQQQPGQSMRN 701
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0821 701 MobiDBLite consensus disorder prediction 439 462 - -
Lele21g0821 701 ProSiteProfiles WRC domain profile. 149 193 IPR014977 -
Lele21g0821 701 SMART QLQ_2 78 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele21g0821 701 Pfam QLQ 79 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele21g0821 701 Pfam WRC 151 190 IPR014977 -
Lele21g0821 701 PANTHER UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 483 692 IPR013921 GO:0003712|GO:0006357|GO:0016592
Lele21g0821 701 ProSiteProfiles QLQ domain profile. 79 114 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele21g0821 701 Pfam TATA-binding related factor (TRF) of subunit 20 of Mediator complex 478 684 IPR013921 GO:0003712|GO:0006357|GO:0016592
Lele21g0821 701 MobiDBLite consensus disorder prediction 193 258 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele21g0821 Lele-ChrLele21 5386108 5395304 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0821 79 194 GRF Transcription Factor Family AT4G37740 50.427 5.31e-33 132
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele21g0821 Med20 2.4e-40 CL0273