Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0804 ATGGCGTCTTCTCCTTCTCCGAAGCCGAAAGGCTTGATTTCCTCCAATTCGTACTTAACACTTATGGCTGCTCTTATATCTGCCTCTGGTCCTACAGTTCCTCATCCCAGTCTAGCTTTTCGGAACCACCAGTACACCTGCTTAGAGCTGCAACAATCCCATCTCTTGAGGCTGGCATGGACAGATTTACAAAGACGGTTCTTTCAGGAAGCAAGGATTAAGGGTGCTGAGATTCAGACAGATCTGATGAGGAACTTGTTTCCAGAAGAATTTTCTAGACAGTCCCATCTAGCTGAACTGAAGAATAATCTACCTTCGTCGTCTTCATCTTCTTTGAGATCATTATCCACTGCCAGCAGTCCCGAATCCAAATCCCTCCTGCTACTCGGTGGTGATATTCCGGCGGGCACTTCTTCTCTCTTGCCGGAGATGCTGCTGCAACAAGAGAATGAACACAACGCCATAGTTAGAGCAATTCTTCATGTTATATCTTCGCCTTCTTCTTCTGATAATAGACATCCACCAGAAGGAACCAGTGCTTTTACGAGGTACAGACCTTCAGAAATGTTGAGTTCCCAACCCAGTAATTTGAGCAGCAGGAACCAAAGCTTGATCAAGAGATCATTCGAATTGTTCAGAGGCTTACATTACATGAGAAATATGAGAGAGCGTTATCAAGTAAGTCGTCCCACTAGTACCCAGCTCCTACATATTATATCAGAACGAAGAAGACGCGAGAAGCTCAACCAGAATTTTCAGGCACTTAGGTCACTACTCCCTCCAGGAACCAAGAAAGACAAAGCTTCAATACTTACAGCAGCGAGGGAAACATTGAACTCTTTGGTGGATGAGATTGAGAAGATGACCAAAGGAGATCATCAGCAAGTAGTGGCACAAATGAAAGCCAAGGAATTATTAATAAAAGATCAAGAAACGAAAACTGAAAGATTGAGTGTTCGAGTTTCAGATGTGGCACGGTCGTCGAGCTCATCATCAGAGGAAAGATTCATCGATCTGCAAGTGACTGTGAGAGGACAAAGATATTCTCTATCCCAGTTATTGATTCGGCTATTGGAATTCTTGAAAGGGGTTCAGAAAGTGAGCTTAGTTTCTATAGATGCTAACACACATCATATAGCACAAGGAGCCGCCATTAATGAAGTAACTTTAAGACTCAAGATAGAGGGGAGTGAGTGGGATGAGGCTGCCTTGAGGGAAGCAGTGAGAAGAGTGGTTGCTGACCTGGCAGAGTGA 1254 0.4418 MASSPSPKPKGLISSNSYLTLMAALISASGPTVPHPSLAFRNHQYTCLELQQSHLLRLAWTDLQRRFFQEARIKGAEIQTDLMRNLFPEEFSRQSHLAELKNNLPSSSSSSLRSLSTASSPESKSLLLLGGDIPAGTSSLLPEMLLQQENEHNAIVRAILHVISSPSSSDNRHPPEGTSAFTRYRPSEMLSSQPSNLSSRNQSLIKRSFELFRGLHYMRNMRERYQVSRPTSTQLLHIISERRRREKLNQNFQALRSLLPPGTKKDKASILTAARETLNSLVDEIEKMTKGDHQQVVAQMKAKELLIKDQETKTERLSVRVSDVARSSSSSSEERFIDLQVTVRGQRYSLSQLLIRLLEFLKGVQKVSLVSIDANTHHIAQGAAINEVTLRLKIEGSEWDEAALREAVRRVVADLAE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0804 417 SMART finulus 238 287 IPR011598 GO:0046983
Lele21g0804 417 CDD bHLH_AtbHLH_like 237 288 IPR045239 -
Lele21g0804 417 Gene3D - 232 308 IPR036638 GO:0046983
Lele21g0804 417 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 61 414 IPR044658 -
Lele21g0804 417 MobiDBLite consensus disorder prediction 184 201 - -
Lele21g0804 417 MobiDBLite consensus disorder prediction 165 201 - -
Lele21g0804 417 Pfam Helix-loop-helix DNA-binding domain 237 281 IPR011598 GO:0046983
Lele21g0804 417 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 294 IPR036638 GO:0046983
Lele21g0804 417 Coils Coil 401 417 - -
Lele21g0804 417 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 232 281 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0804 Lele-ChrLele21 5274950 5278621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0804 36 416 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 37.281 4.75e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele21g0804 HLH 8.7e-11 No_clan