Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0788 ATGAGCTGTCTTGGTGTCTCAGTGGCAGCTCTATGCTGTGCATTGGTGGTGTTCGCAGGAACAATATCAGTTTCATATGCTCAGTTAGATCCTTCGTTTTACGACAAGTCATGTCCAAAAGTGCATTCCATTGTAACAGAGGTTGTTCTTAATGCTTTAAGATCTGATTCTCGTATTGCTGCCAGTCTCATCAGGCTTCACTTCCACGATTGCTTCGTCCAAGCGGGTGGTCGGGGATGGAGTGTTCAACTGGGAAGAAGGGACAGCACAACCGCCAACAGATCACTGGCCAACACAAACCTTCCTCCTCCATTCTTCAACTTGACTCAACTCAAAGCCTCCTTCGCTGCTCAGGGCCTCAACACCATTGATCTCGTTGCTCTCTCTGGTGCTCACACTTTTGGAAGATCACACTGCAGCAATTTCGTGGACAGATTATACAATTTCACTGGCACTGGTCGACCCGACCCAACTCTCAACCCATTGTACCTTCAAATGCTTCGCCTGAGATGCCCTAAGAATGGAGACGGCTCCAACTTGGCCAATTTTGACCCGACCACTCCTGACAAGTTCGACAAGAACTATTACAACAACCTTCAATTTCACAGTGGCCTGCTTAACAGTGACCAAGTCTTGTTCTCCACTTCTGGTGCTGACACCGTCCCCATTGTCAACAGCTTCGCTTTCAACCAAGAACTGTTCTTCTCTCAGTTCGCAGCTTCCATGATCAAAATGGGTAATATCAGCCCCTTGACTGCCTCTGGTGGCCAAATTCGATCTCACTGTAATTTTGTCAACTCACGCTCCCCTGATCCATTCACTAATACCAAACAATCTCATGATGATGCTCTTGTTACCTCTATCTAA 867 0.4706 MSCLGVSVAALCCALVVFAGTISVSYAQLDPSFYDKSCPKVHSIVTEVVLNALRSDSRIAASLIRLHFHDCFVQAGGRGWSVQLGRRDSTTANRSLANTNLPPPFFNLTQLKASFAAQGLNTIDLVALSGAHTFGRSHCSNFVDRLYNFTGTGRPDPTLNPLYLQMLRLRCPKNGDGSNLANFDPTTPDKFDKNYYNNLQFHSGLLNSDQVLFSTSGADTVPIVNSFAFNQELFFSQFAASMIKMGNISPLTASGGQIRSHCNFVNSRSPDPFTNTKQSHDDALVTSI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0788 288 Gene3D Peroxidase, domain 2 102 245 - -
Lele21g0788 288 MobiDBLite consensus disorder prediction 269 288 - -
Lele21g0788 288 FunFam Peroxidase 102 245 - -
Lele21g0788 288 SUPERFAMILY Heme-dependent peroxidases 28 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lele21g0788 288 Gene3D - 76 266 - -
Lele21g0788 288 Gene3D - 28 75 - -
Lele21g0788 288 ProSitePatterns Peroxidases proximal heme-ligand signature. 124 134 IPR019793 -
Lele21g0788 288 PANTHER PEROXIDASE 72-RELATED 26 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Haem peroxidase superfamily signature 124 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 PRINTS Haem peroxidase superfamily signature 10 27 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 CDD secretory_peroxidase 28 265 IPR033905 GO:0004601|GO:0042744
Lele21g0788 288 Pfam Peroxidase 74 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele21g0788 288 ProSiteProfiles Plant heme peroxidase family profile. 28 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0788 Lele-ChrLele21 5144898 5147277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0788 15 73 Peroxidase AT5G06730 49.153 1.03e-13 68.6