Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0744 ATGCTCAGAAAGACTTCTTTTCCAGATTCTCCTCTTCGATCTCCACTTTTCCGCCGAATTCCCCTCGTTAGATCTTATCTCGCTTCATTCCCAACTCGCTCTTTTTCTTCTCTCTCACTGGATTGTTTTCTTCGGAATCTACTGCAGAAAAGCATGGCTAGTTCTGAAGGAGAACTTGAAATAAGTTTTGGCTATCAATGCAATAGTAACAGAGTTTCCTCTTGTAATTTAATCGATAACTATAAAATCCTTCCCGCACTCCATAAAACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACATTAGCCAACACCAACATCTGCGATGGTGTGATAGGAGAAGAAATTCTTCCAAGCTGGGACTCCCCCAATATGTTTCGTAAGGTAGCTTCTTCTTCAACCCTTTCAAGGTTTGATATGCTGTCATCTTCTCTCCCAAGCACTTTGTCAAATTTAAGTTGCAGTCCATCCACCCCGACTAATATGCTTGGACATGAAATAAAATCCCCCATCGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTTTTTTGTGCTATTTACGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATTCAGAAATGGAGACAGATTCTGTCGGTACCTCTAACAATATGGGTTTGGATGGATCAGACCAACATAAGTTGGATGATAGCTTTTATAATTGTGACGAACAATCATTTTCAGATGGGGTACTTGATTGCCTGCAGCGTGCTCTTAGCCAGGTTGAGAATGATTTCTTAAACATGGTTGAGCAAGAAATAGAGGATCGCCCAGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAACTGTATACACTTAATATTGGTGATAGCAGAGCAGTATTGGCAATGAGCAGTCGTGAATCAAATTGGGGTGGAAAACTCACAGCTATCCAGCTTACAGATAGTCACACTGTTGAAAATGAAGCTGAAAGAGTTCAGCTTCTGGCTGATCATCCTGATGATCCTAGGACCATTATATCAGGAAGAGTGAAAGGAAAGCTGAAGGTTACACGTGCAGTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATTCTTCGGGTTCGTGATCTTGTAAGCCCTCCATATATTTCCTCGGAACCATCATTAGGAGTGCATAAGATCTCAAGCTCTGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCCGTGGAGCTTGTAGAGTCTTATATCCACACCAATCCTTCTGGTGATCCAGCAAAGTTTCTCGTCGAGCAACTTGTATCAAAGGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACAGTAATTGTGATCATCCTTGGCACAAATCAGCGGACTTTAAAGGCGTCAACTTGTATATGA 1623 0.419 MLRKTSFPDSPLRSPLFRRIPLVRSYLASFPTRSFSSLSLDCFLRNLLQKSMASSEGELEISFGYQCNSNRVSSCNLIDNYKILPALHKTSSFSCLSGAALSANATLANTNICDGVIGEEILPSWDSPNMFRKVASSSTLSRFDMLSSSLPSTLSNLSCSPSTPTNMLGHEIKSPIAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYSEMETDSVGTSNNMGLDGSDQHKLDDSFYNCDEQSFSDGVLDCLQRALSQVENDFLNMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNIGDSRAVLAMSSRESNWGGKLTAIQLTDSHTVENEAERVQLLADHPDDPRTIISGRVKGKLKVTRAVGVGYLKKKSLNDALMGILRVRDLVSPPYISSEPSLGVHKISSSDHFVIVGSDGLFDFFNNDEAVELVESYIHTNPSGDPAKFLVEQLVSKAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNQRTLKASTCI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0744 540 PANTHER PROTEIN PHOSPHATASE 2C 192 525 IPR015655 GO:0004722|GO:0006470
Lele21g0744 540 Gene3D - 165 535 IPR036457 -
Lele21g0744 540 Coils Coil 287 307 - -
Lele21g0744 540 ProSiteProfiles PPM-type phosphatase domain profile. 184 527 IPR001932 -
Lele21g0744 540 CDD PP2Cc 197 527 IPR001932 -
Lele21g0744 540 Pfam Protein phosphatase 2C 207 481 IPR001932 -
Lele21g0744 540 SMART PP2C_4 178 525 IPR001932 -
Lele21g0744 540 SUPERFAMILY PP2C-like 198 528 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0744 Lele-ChrLele21 4887126 4891874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0744 57 540 PP2C-type Phosphatase Gene Family AT3G16560 62.298 0.0 575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0744 21 4887126 4891874 Lele23g1299 23 18219396 18222847 hybridization
Lele21g0744 21 4887126 4891874 Lele24g0721 24 4811538 4813500 hybridization