Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0740 ATGGAGGATTCCGTAGGGCAAAAGAAGAACAACCGTGAGTTTACTTTGGTATCAGTTGCTGAGCTCTCTTCGCGTGCTTCGTCTGCATCGCCGGGTATTGCTCGCTTCACTTACGACGGTCCCGTGGCGCAGCTGCAAATTCATCAAGATTCTCACAAGATTGATATCGATGTTGATCTTCGAACTGCTCAGATATTCAAATTAGGCCCTGTTCAATCAGTTTGCATGGTCGAAGGGTCTGTTGTCGATGACCAGACATCATTCTCAAGGGGAATATTTCTCCAGTTTAGAAATGAGGAGGAAAGTGGGGCCTGTGATAGTGTATTCCAGCAATGGAAGAAGGAAGCGAGTGCTCAAGATTCCGGTAGAAGCTTACCAAATGGAATTATACCAAGTTCTACAAGTAAATTTGATGAGAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTACTATGGGCAGCTTCTGCATCAGCAAAATATGTTGCAAGACTATGTTAGAACAGGAACCTATTATGCTGCAGTTATTGAGAACCGTGCCGATTTCATGGGCCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAGGCATCCGAAATGACAGAATATGCACGGAAACTTATAGCTGGAAACCCAATGCTCAGTCAACGAATTACAGTAATAAAGGGCAAGGTTGAGGATGTAGAATTGCCAGAGAAAGCGGATATTTTGATCTCTGAGCCCATGGGAACCTTGTTAGTAAATGAAAGGATGTTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCACTCCTGAAGGGAAAATGTTTCCCATGGTGGGAAGGATTCACATGGCACCTTTCTCTGATGAATATCTGTTTATCGAAATTGCTAATAAGGCATTGTTTTGGCAGCAACAAAACTATTACGGTGTTGATTTGACTCCCTTGTATGGCACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGAGTGTTAATAGCTCCTCCTATGTTCCATGTGTTAGACTTCACAAAAATAAAGGAAGAAGAGCTGTATGAAATAGATATACCTTTAAGATTCGTAGCATCTGTGGGTGCACGAGTACATGGGCTGGCTTGTTGGTTTGATGTACTCTTTAATGGAAGTACCGTGCAAAGGTGGCTTACGACTGCCCCAGGGTCGCCAACAACTCACTGGTACCAGTTGCGCTGTGTTCTTTCTCAGCCAATTTATGTCATGGCGGGACAAGAAATTACTGGCAAGCTCCACATGGTTGCTCACAATGCCCAGAGCTATACGCTATATTTAACATTGTCAGCTAAAATGTGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACCTCATCGTGCAAACTTGATTTGAAAGAACCCTACTATAGAATGTCTCAACCGCAAGCTTACACATTAGCCCAAGACCAGCAACAACCGCCACTTCTACACACACAGGACATACCAATTCAATCACAAGATTTAGATGAACCTGAGATGATGCAACAACCGTCGCCTAATTCATGTGCTCAGGTTAATTCATTGATGCAGAATATTTAA 1626 0.4317 MEDSVGQKKNNREFTLVSVAELSSRASSASPGIARFTYDGPVAQLQIHQDSHKIDIDVDLRTAQIFKLGPVQSVCMVEGSVVDDQTSFSRGIFLQFRNEEESGACDSVFQQWKKEASAQDSGRSLPNGIIPSSTSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMTEYARKLIAGNPMLSQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPEGKMFPMVGRIHMAPFSDEYLFIEIANKALFWQQQNYYGVDLTPLYGTAFQGYFSQPVVDAFDPRVLIAPPMFHVLDFTKIKEEELYEIDIPLRFVASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGKLHMVAHNAQSYTLYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYTLAQDQQQPPLLHTQDIPIQSQDLDEPEMMQQPSPNSCAQVNSLMQNI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0740 541 MobiDBLite consensus disorder prediction 117 136 - -
Lele21g0740 541 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 463 IPR029063 -
Lele21g0740 541 FunFam Probable histone-arginine methyltransferase CARM1 291 499 - -
Lele21g0740 541 MobiDBLite consensus disorder prediction 518 541 - -
Lele21g0740 541 FunFam Probable histone-arginine methyltransferase CARM1 129 289 - -
Lele21g0740 541 Gene3D - 291 499 - -
Lele21g0740 541 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 107 472 IPR025799 GO:0016274|GO:0018216
Lele21g0740 541 CDD AdoMet_MTases 188 288 - -
Lele21g0740 541 Gene3D Vaccinia Virus protein VP39 131 289 IPR029063 -
Lele21g0740 541 Pfam Ribosomal protein L11 methyltransferase (PrmA) 185 258 - -
Lele21g0740 541 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 142 457 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0740 Lele-ChrLele21 4840043 4845453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0740 149 439 C2H2 Transcription Factor Family AT3G12270 32.686 4.53e-37 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0740 21 4840043 4845453 Lele23g1304 23 18253043 18258499 hybridization
Lele21g0740 21 4840043 4845453 Lele24g0716 24 4777082 4782586 hybridization