Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0715 ATGGGTAACAATGAACACGAAAGGAAGAAAAAGATTGCTGCTATTTCCGTATCTGGTATCCTCCTTGTGGCCATGGTGGCCGCTGTAGGCGTAGGTCTATCCGGTGCCAACGACGCCTACGATGCCGTTGCGTCCGAGGACGATCACGGTGAGAAGAAACAGATTTCCGCCTCTCAAAAGGACGTGGAAATGCTTTGTAGTTCTGCCCAATACAAAGAAACCTGCAAGCGCAGCCTCTCAACTAAGGCAATCAATGGCACCACCGACGTTAAAGAACTCATCAAAACCGCCTTCCACGCCGCCGCCAAGGAGTTCAAGAAGTTCATCGACAACTCCACCCTCTTCGACGAGCTTGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTGCTCGATTACGCCATCGACGACGTTAGGAACTCCATCAATAGCGTCGAACAGTTCCATATAAGCAAGCTCGGCGAATACGCTTACGACGTTAAAGTTTGGCTCGGAGGCACTATCTCCCACCAGCGCACCTGCTTGGATGGTTTCGAGAACACCACCACTCACGCCGCTGAGACCATGTCCAAGGTTTTGAACACCTCCCTCGAGCTCAGCATGAACTCTTTGGACATTATCTCTGGCCTCTCCGACATCGCCCAAGCCTTCGGATTCGTCGGCTTCGGAGGGTTCAGCGGCGGCGGCATGCAGATAACTCATGGCGATAACAACACCGGCAGCCCACATCAAGCTCATGGAGATAGCCACACCGGAGGCCAGCAAGGTCATGGCGATAACAACAACGGGGACCTGCAAGCACATGGGCATGAAAACACCTCCAGTCGGAAGCTTCTCGAGAGTCTGCCGTCGTGGGTAAGTGATAGCCAACACCGTCATCTCCTCGCTGCAGCCGCAGCCGGTGCCGCCAATGTTAAGCCCGACGCTGTTGTGTCTCAAGACGGAAATGGCCAGTTCACAACACTCACCGACGCTCTTAAAAATGTTCCGAAGGGAAATATGAAACCCTATGTCATTTACGTTAAGGCCGGCATATATAAGGAAATTGTGAGCATTCCCAAGACATCCAGTTATGTCACCATCGTCGGAGATGGTCCCACCGTTACCAGATTCACCGGCAGTCTCAACTATGCCGACGGCGTCCAAACTTACAAAACCGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGGGTTCGAGAACTCAGCCGGAGCAATTAAGCATCAGGCTGTGGCGCTCCGAGTAACAGCAGATAAAGCCGTCTTCTACAACTGCCAAATGGACGGGTACCAAGACACACTCTACGCACAGTCCCACCGCCAGTTCTACCGTGACTGCGTCATCTCCGGCACTATCGACTTCATCTTCGGCGACGCCGACATGATCTTCCAAAACTGCACTTTGGTCGTCAGGCCAGCTTTAAGCAACCAGAACTGCATCGTCTCCGCCAGTGGCCGAGATGTGATCAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGCCGCTTCACCGCCGATCCGCTCTTCCTCTCCGACAAAGCGCAGAAGCCAGCATACCTTGGACGACCATGGAGGGCATATGCCAAGGTGGTGATCATGGATTCTCAGATCGACGGGATCTTCGCACCCGAAGGTTACTTGTCGTGGATGGGTAGCATCTATCACTTGACCTCCGTCTTCAATGAATACAACAACAAAGGTCCCGGCGCCGATAACTCTCACAGAGTGAAATGGCCCGGCGTGAAAGCGATCACTGCAACTCAAGCTTCAAATTACTACCCTCAAAAGTTCTATGATTTCCGCAACGCCACTTCTTCTGAAGACGATTCCTGGATCTCTGCCGCTGGGATTCCCTACTCCGTTGGCCCCATGGCCGTACCAAATTGA 1908 0.5309 MGNNEHERKKKIAAISVSGILLVAMVAAVGVGLSGANDAYDAVASEDDHGEKKQISASQKDVEMLCSSAQYKETCKRSLSTKAINGTTDVKELIKTAFHAAAKEFKKFIDNSTLFDELAKDNMTKQAMEICHEVLDYAIDDVRNSINSVEQFHISKLGEYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMSKVLNTSLELSMNSLDIISGLSDIAQAFGFVGFGGFSGGGMQITHGDNNTGSPHQAHGDSHTGGQQGHGDNNNGDLQAHGHENTSSRKLLESLPSWVSDSQHRHLLAAAAAGAANVKPDAVVSQDGNGQFTTLTDALKNVPKGNMKPYVIYVKAGIYKEIVSIPKTSSYVTIVGDGPTVTRFTGSLNYADGVQTYKTATFGVNAPYFTAMHVGFENSAGAIKHQAVALRVTADKAVFYNCQMDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDADMIFQNCTLVVRPALSNQNCIVSASGRDVINSPSAMVFQSCRFTADPLFLSDKAQKPAYLGRPWRAYAKVVIMDSQIDGIFAPEGYLSWMGSIYHLTSVFNEYNNKGPGADNSHRVKWPGVKAITATQASNYYPQKFYDFRNATSSEDDSWISAAGIPYSVGPMAVPN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0715 635 Gene3D - 309 631 IPR012334 -
Lele21g0715 635 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 214 IPR006501 GO:0004857
Lele21g0715 635 MobiDBLite consensus disorder prediction 235 280 - -
Lele21g0715 635 SUPERFAMILY Pectin lyase-like 309 628 IPR011050 -
Lele21g0715 635 MobiDBLite consensus disorder prediction 235 273 - -
Lele21g0715 635 Pfam Pectinesterase 312 605 IPR000070 GO:0030599|GO:0042545
Lele21g0715 635 PANTHER PECTINESTERASE 18 620 - -
Lele21g0715 635 ProSitePatterns Pectinesterase signature 2. 456 465 IPR033131 -
Lele21g0715 635 CDD PMEI-like_3 65 215 - -
Lele21g0715 635 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 214 IPR035513 -
Lele21g0715 635 ProSitePatterns Pectinesterase signature 1. 337 356 IPR018040 -
Lele21g0715 635 FunFam Pectinesterase 58 215 - -
Lele21g0715 635 Pfam Plant invertase/pectin methylesterase inhibitor 62 208 IPR006501 GO:0004857
Lele21g0715 635 SMART PMEI_2 57 210 IPR006501 GO:0004857
Lele21g0715 635 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 215 IPR035513 -
Lele21g0715 635 FunFam Pectinesterase 4 309 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0715 Lele-ChrLele21 4681119 4683125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0715 3 632 Carbohydrate Esterase AT3G05610 40.254 2.12e-165 487