Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0702 ATGCAGATTTGGGCTGTACTAAAACCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATAACCAACCTTTGGACATTATTGTTTTTGATGTACTTCGCGCCTCAGATGGGAATAGAGAAGGTTGTCCATCTCTAGCAACAGAAATGGTTGACCAAACCCTTTACGCCATTCATTCAATGCTGGTGCCATCCTCACCGTTATGGTTCTTTTGCTCCTCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAATGGTTCGTAGATGGCCAGGCAGCATTTGAAGCCATTTCTGCTTCAATTGAGGAAGCAAAATCGGAGATATTTATTTGTGGGTGGTGGCTGTGCCCAGAACTGTATATGCGGCGTCCTTTTCACTCTCATGCTTCATCAAGGATTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATGCTTATTCTTCTCTACAAAGAAGTAGCTCTTACTTTGAAAATCAACAGCATTTACAGCAAGAAAAAACTTCTCAGCATTCATGAGACTGTGAAGGTGTTACGCTATCCTGATCACTTTTCTAGTGGCGTTTACCTGTGGTCCCACCATGAAAAACTAGTTATTGTTGATCACCACATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGAGCACAGAGTAGGAGATTACCCTCCTTTGATCTGGCCTGGGAAGGACTATTATAACCCTAGGGAATCTGAACCAAACTCATGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCGATGGCATGATGTCCACTGTGCCATTTGGGGACCACCTTGTCGTGAAATTGCTAGGCACTTTGTTCAACGATGGAATTATGCAAAGAGGAACAAAGCTCCCTATGAGCAAGCAATACCATTACTTATGCCTCAGCAGCATATGGTTATTCCACACTACTTGGGAAAAGACAGAGAATTGGAGATTGAAAACGAGAAACCTATCAATCATAGAAGAATGAGAAGGGATGATTCCTTTTCCCTATCACCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGATGGGCCACATACTCCTAAAGGATACCAAGAATCAAATGGGTTAAGCCCCTTCTCAAATCTCAATAAGCCAATCAAGAAGAGTGCAGATAGAGTTGCTTGTGTCAGCACAAAAGGCACAGATACTGAATGGTGGGAGGCACAAGAAAGGAGTGATCAGGGAGGCTTTGCTGATGAATCTGGAAGAGTTGGTTCTCGTGCTTCCTGTCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTTCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATATTTCATCTACATAGAGATATTTAATGGAGACCTTGATGATAATGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAATATCCAACCATATGTAGGGGACAAAAATCTATATTGCATAATCTCTGTGATCTCCTGGGTTCAAAAGCCCATGACTACATATCTTTCTTTGGCCTCAGGGCTTATGGAAGACTCTTTGATGGTGGTCCGGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATAGTAGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGTTCCAGAGACTCTGAGAAGACAGAGTTAACTGGATCATTTATGGGTGGAAAACCATGGAAAGTAGGGAAGTTCTCACTGACTCTTCGATTGTCATTATGGTCTGAACACTTGGGTCTCCAAGGAGGAAAGATTGATCAAATAGCGGACCCAATTGTTGATTCTACTTATAAGGCATTTGGATGGCAAGAGCCAAGGCAATTGAAGGAATAA 1911 0.4228 MQIWAVLKPGFLAFLADPFDNQPLDIIVFDVLRASDGNREGCPSLATEMVDQTLYAIHSMLVPSSPLWFFCSSRGLIEDDSQAQWFVDGQAAFEAISASIEEAKSEIFICGWWLCPELYMRRPFHSHASSRIDNLLEAKAKQGVQMLILLYKEVALTLKINSIYSKKKLLSIHETVKVLRYPDHFSSGVYLWSHHEKLVIVDHHICFIGGLDLCFGRYDTPEHRVGDYPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMRWHDVHCAIWGPPCREIARHFVQRWNYAKRNKAPYEQAIPLLMPQQHMVIPHYLGKDRELEIENEKPINHRRMRRDDSFSLSPSQNIPLLLPQESDGPHTPKGYQESNGLSPFSNLNKPIKKSADRVACVSTKGTDTEWWEAQERSDQGGFADESGRVGSRASCRCQVIRSVSQWSSGTSQTEQSIHNAYCSLIEKAEYFIYIEIFNGDLDDNGAASVRAIMHWQYPTICRGQKSILHNLCDLLGSKAHDYISFFGLRAYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEKTELTGSFMGGKPWKVGKFSLTLRLSLWSEHLGLQGGKIDQIADPIVDSTYKAFGWQEPRQLKE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0702 636 CDD PLDc_vPLD1_2_yPLD_like_1 83 227 - -
Lele21g0702 636 Gene3D Endonuclease Chain A 73 313 - -
Lele21g0702 636 Pfam Phospholipase D Active site motif 190 217 IPR001736 GO:0003824
Lele21g0702 636 Pfam Phospholipase D Active site motif 541 564 IPR001736 GO:0003824
Lele21g0702 636 SUPERFAMILY Phospholipase D/nuclease 64 310 - -
Lele21g0702 636 PANTHER PHOSPHOLIPASE D 79 469 IPR015679 -
Lele21g0702 636 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 190 217 IPR001736 GO:0003824
Lele21g0702 636 SMART pld_4 537 564 IPR001736 GO:0003824
Lele21g0702 636 SMART pld_4 190 217 IPR001736 GO:0003824
Lele21g0702 636 PIRSF PLD_euk 389 470 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele21g0702 636 PIRSF PLD_euk 1 65 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele21g0702 636 PIRSF PLD_euk 470 633 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele21g0702 636 PIRSF PLD_euk 70 339 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele21g0702 636 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 537 564 IPR001736 GO:0003824
Lele21g0702 636 CDD PLDc_vPLD1_2_yPLD_like_2 443 572 - -
Lele21g0702 636 MobiDBLite consensus disorder prediction 330 377 - -
Lele21g0702 636 Gene3D Endonuclease Chain A 470 576 - -
Lele21g0702 636 SUPERFAMILY Phospholipase D/nuclease 425 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0702 Lele-ChrLele21 4603020 4607527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0702 2 611 Phospholipase D Gene Family (Wang group) AT3G16785 58.172 0.0 750