Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0701 ATGGTTCTCTTTCCATCGCTTGTTAATGGATTGGCGAGAACTGTGTCATTCAGAAGAGAAAAGAATAGTCCAAAGGATGAAGACGATGGAAGGAAAGTGGTGGAAGCATTGGCCAAAGAAGCAAAGAAGAATGAATTGTTATTGAGTTCATCTGGAACTGTAAAATCTCATAACGCTAACACTTTTGCATCTGTCTTCTCCAAGAGAGGCACAAAAGGGACCAATCAGGATCGTCTTGCTGTTTGGGAGGGATTTGGTTGCCAAGATGACATGATCTTCTGTGGGATATTTGATGGACATGGGCCTTGGGGACACTTTGTAGCCAAAAGGGTGAGAAAATTGATACCTGTTTCTTTACTCTGCAACTGGCAAGAAGCTTTGGCTGCAACATCACTTGATCTGGATTTTAAATTTGAAGAAGACAGAAACCTTCATTGGTTTGACCTATGGAAGAAATCCTACTTAAAGACTTGTGCTGCTGTGGATCAGGATCTGAAGAACCATGCCCGGTTTGATTCTTTTCAAAGTGGTGCTACTGCTTTGACAATTATTAAACAGGGTAGACTTCTCACCATAGCAAATTTAGGTGATTCTAGGGCTGTTTTGGCAACTGCTTCAGAGGATGGTGATGGAACATTGATTCCTCTTCAACTTACCACTGATTTAAAGCCAAACTTACCAGAGGAAGCAGAGCGCATAAAGCAGTGTAGAGGGAAGGTGTTTTGTATGGAAGATGAACCAGGAGTATACAGAGTTTGGTTGCCAAATGGTAAAACTCCAGGGCTTGCCATTTCAAGAGCCTTTGGCGATTACTGTGTCAAGGACTTTGGACTCATCTCTGTGCCTCAAGTCACACAAAGAACGCTCACCACCAGGGATCAGTTCATAATCTTGGCATCAGATGGGGTATGGGATGTTATTTCCAACGATGAAGCTGTGAAGATTGTATCCTCAGTGCCTCAGAAGGAAAAAGCAGCTCAGAGACTGGTTCAATGTGCCGCATACGAATGGAAACGAAAGAGAAGTAACATAGCCATGGATGACATGTCTGCTATTTGTCTCTTCTTTTACTCTTCTTCTTCATCTTACTCACTTAAAACTCCTAAACTTGTCAAATAA 1119 0.4218 MVLFPSLVNGLARTVSFRREKNSPKDEDDGRKVVEALAKEAKKNELLLSSSGTVKSHNANTFASVFSKRGTKGTNQDRLAVWEGFGCQDDMIFCGIFDGHGPWGHFVAKRVRKLIPVSLLCNWQEALAATSLDLDFKFEEDRNLHWFDLWKKSYLKTCAAVDQDLKNHARFDSFQSGATALTIIKQGRLLTIANLGDSRAVLATASEDGDGTLIPLQLTTDLKPNLPEEAERIKQCRGKVFCMEDEPGVYRVWLPNGKTPGLAISRAFGDYCVKDFGLISVPQVTQRTLTTRDQFIILASDGVWDVISNDEAVKIVSSVPQKEKAAQRLVQCAAYEWKRKRSNIAMDDMSAICLFFYSSSSSYSLKTPKLVK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0701 372 SMART PP2C_4 55 354 IPR001932 -
Lele21g0701 372 Pfam Protein phosphatase 2C 74 333 IPR001932 -
Lele21g0701 372 FunFam Probable protein phosphatase 2C 34 53 358 - -
Lele21g0701 372 SUPERFAMILY PP2C-like 53 356 IPR036457 -
Lele21g0701 372 CDD PP2Cc 62 353 IPR001932 -
Lele21g0701 372 Gene3D - 47 357 IPR036457 -
Lele21g0701 372 PANTHER PROTEIN PHOSPHATASE 44 354 - -
Lele21g0701 372 ProSiteProfiles PPM-type phosphatase domain profile. 62 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0701 Lele-ChrLele21 4597451 4599699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0701 1 365 PP2C-type Phosphatase Gene Family AT3G05640 59.726 1.97e-163 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0701 21 4597451 4599699 Lele23g1340 23 18484052 18496438 hybridization
Lele21g0701 21 4597451 4599699 Lele24g0684 24 4536339 4539987 hybridization