Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0681 ATGGTTTCGGATTCCCGTTGCTGCTGCCTCTCCTTCCAAGTCGTCGTCTTCCTCATCTTCTTCGCACTGCCTTCGATTTCTCGTGCCCAGACTGCCAGCTCCTGCAATGGCATACTCGTGTCCTACGCATATACCGGCGGGACACGGCTGCCGCCCAATGTCTCCGATCCCAAGCAGCAACCGTACCGATTCGAATCCACGATCACTGTGCTCAACAATGGACTCGACGAACTCAAGTCCTGGAAGGTTTTTGTGGGGTTCCAGCACAACGAGTTCTTAGTCTCTGCATCTAATGCGGTGCTCGACGACGGCACTAGCCTCCCTGCTGGCGTCGGAAACGGTACCGTCTTTGCTGGGTACCCCATGGCTGATCTCAAGACGGCCGTCGAGACTGCTGGGGACTTGACGCAGATGCAGGTTCAGATCGATTTGGTAGGCACGGTGTTCGGGGTAGCGAGTCCCAACATGCCGATGCCCGCAAACATCACCCTCGCCAATGATGGATTCGTCTGTCGTAAGCCCACTGGTCAAGGTAAGAATGAGACTCGAGTCTGTTGTACAAAAGATCCCAAATTCAAGACAAACATAACCACGGATGAAGAATTCCTTCCTCGCCAGAATGGTGATCTTACAATCATGTATGATGTGATCAGAACTTACGATTCCAATTATTGGGCAGAGGTTACAATCTCAAATCATAATCCTCTTGGTCGTCTTGACAACTGGAAATTAAACTGGGACTGGATGAAGGGCGAGTTCATTTATTCAATGAAGGGGGCATATCCAACTAATGTGGATTCTTCCGATTGTATATTTGGCCCACAAGGCACATACTATAAAGATCTTGACTTTGCTAATGTACTGAATTGTGAAAGAAGGCCGACGATAATCGATCTCCCTCCCTCAAAGTTTAATGACACAGACCTGGGGAAGATCCCTTTTTGCTGCCGGAATGGTACAGTCTTGCCACCATTGATGGACCCAAGCATGTCATCTTCAAGATTCCAAATGCAGGTCTTTAAATTGCCACCAGACCTTAATCGCTCCCAGCTTTCGCCACCGCAGAACTGGAAGATAAGCGGTACACTAAACCCTGACTACAAATGTGGCGCGCCCATCAGGGTAAGTCCTACTGAAACCCCAGATCCTTCAGGCATACCATCAAACAAATCTTCAATGGCGAGCTGGCAGATTGTGTGTAATATAACACAGGCCAAAGGGGCACCGCGTAAATGCTGTGTTTCATTTTCTGCATATTATAACGAATCTGTCATTCCTTGCAAAACATGTGCATGTGGCTGCCCCAGTAACACAGGAAAAACTTGCAGTACTTCTGCACCAGCTATGCTTCTTCCACCAGAGGCAATTCTTGTTCCTTTTGTGAATCGGACTGCTAAGGCTCTTGCTTGGGCGAGTCTGAAACATCTCTCGGTGCCTAAGCCAATGCCGTGTGGTGATAACTGCGGTGTGTCGATAAACTGGCATCTTCTTACAGACTATAGCCGAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGAGACACTAATTTTGCTGACTGGTTTGCTGCTGTGCAAATGGATAAAGCAGCTGCAGGTTTTGAGAAGATGTATTCATTCAATGGAAGTACCTTAGATGGTGTTAATAGTACCATATTTATGCAAGGCCTGCCAGGATTGAACTACCTTGTGGCAGAAACCGATGGGGCAAACCCCGTGAGTGATCCGAGGGTTCCCGGTAAACAACAGTCGGTGATCTCTTTTACAAAGAAAACCACCGCCGGAATCAATGTGCCGAGTGGAGATGGGTTCCCTACTAAAGTGTTCTTCAATGGGGAGGAGTGCTCTCTTCCCTCTGTGCTTCCGACCAATGGATTTAAGAAGGAATCTTCGCTAGCTACTTCAATGATCTTGACACTGTTTCTGTTGGTATTTTTGTGGCAATAG 1947 0.4807 MVSDSRCCCLSFQVVVFLIFFALPSISRAQTASSCNGILVSYAYTGGTRLPPNVSDPKQQPYRFESTITVLNNGLDELKSWKVFVGFQHNEFLVSASNAVLDDGTSLPAGVGNGTVFAGYPMADLKTAVETAGDLTQMQVQIDLVGTVFGVASPNMPMPANITLANDGFVCRKPTGQGKNETRVCCTKDPKFKTNITTDEEFLPRQNGDLTIMYDVIRTYDSNYWAEVTISNHNPLGRLDNWKLNWDWMKGEFIYSMKGAYPTNVDSSDCIFGPQGTYYKDLDFANVLNCERRPTIIDLPPSKFNDTDLGKIPFCCRNGTVLPPLMDPSMSSSRFQMQVFKLPPDLNRSQLSPPQNWKISGTLNPDYKCGAPIRVSPTETPDPSGIPSNKSSMASWQIVCNITQAKGAPRKCCVSFSAYYNESVIPCKTCACGCPSNTGKTCSTSAPAMLLPPEAILVPFVNRTAKALAWASLKHLSVPKPMPCGDNCGVSINWHLLTDYSRGWSARVTLFNWGDTNFADWFAAVQMDKAAAGFEKMYSFNGSTLDGVNSTIFMQGLPGLNYLVAETDGANPVSDPRVPGKQQSVISFTKKTTAGINVPSGDGFPTKVFFNGEECSLPSVLPTNGFKKESSLATSMILTLFLLVFLWQ 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0681 648 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
Lele21g0681 648 PANTHER COBRA-LIKE PROTEIN 7 29 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0681 Lele-ChrLele21 4485889 4488234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0681 35 633 COBRA Gene Family AT4G16120 67.608 0.0 881
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0681 21 4485889 4488234 Lele21g0681 21 4485889 4488234 ECH
Lele21g0681 21 4485889 4488234 Lele23g1358 23 18593327 18595670 hybridization
Lele21g0681 21 4485889 4488234 Lele24g0666 24 4435025 4437666 hybridization