Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0674 ATGTCAAAAGGAACTAGTCTGGTGCTGGATTCATCTGAAAATGGCACAGATTTATCTCAGGATGATATTGGAACCATTGAGGAAACCCCAGAAGAGTCAATTTTGTCGCGACAAACTTCTGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCAAAACAATGTGGCTTTTCAATTAGACGACATCGCACTCGAGGAAAGGATGGGGTTGGTCGGGGAGTTACCAGAAGAGATTTTACTTGCCATCGTGGTGGTTATCCCCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGGAATCGCAAATCTTCTCGTTGCGGCTGTCAAGCATACATGCGCATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGAGTGACAGGCTTTAGTAACATCCATAATCACGAGTTATTAAAATCCAATGAGGTGCGTCTTCTTCCAGCATACTGTACAATATCTCCAGATGACAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGATTGATGGAGCTTGAGAAAGGCGTCAAACTTGGTTGTTTACCTTTCACAGAGATTGACGTGAGAAACTTGTTGCAGTCATTTAGAAATGTTGATAGAGACAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTGAAAGATGAAAATCATAACTTCAAGTATGAGTTTAATATTGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCTCACGCATCATCTATTCAGTTGTATGAATCATTCGGAGATGCTGTGGTTTTTGATACAACACACCGTCTGGATGCCTATGACATGTTTTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTCGGTTGTGCACTTTTGCGGGATGAAAATATTCAGTCTTTCTCATGGGCTCTAAAGGCATTCTTAAGCTTCATGGAAGGAAAGGCTCCACAAACCATGTTAACTGATCATAACATGTGGCTGAAAGAGGCCATTTCTGTTGAAATGCCTGAAACCAAACATGCCTTTTGTATATGGCACATTATTGCAAAGTTCTCTGACTGGTTCTCTGTACTTCTTGGATCACATTATGATGAGTGGAAAGCCGAGTTCCATCGGCTATACAATTTGGAACTGGTGGAAGATTTTGAGGAGGGCTGGGGGCAAATGGTTGATAAATATGGACTCCATGCAAATAAGCACATTGTTAGCTTATACTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGGGCTACTTCTTTGCAGGATTGACCAGCACGAATCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGGGTGCCCAATCTCAACTGGATCGCTTTGTAGAGCATGTTGCTGATATTGTTGAATTTAATTACGGGGCTGGGTCAAAGCAAAAGATGCAACGAAAACTGCAGAAAGTGTGCCTTAAAACTGGTTCACCTATTGAATCCCATGCTGCCACAATGCTTACTCCTTATGCCTTTAATAAAATGCAGGATGAACTAGTTTTGGCACCACAATATGCATCATTTCTGGTTGATGAAGGTTGCTTTCAGGTCAGACACCACACTCAGATGGATGGAGGGTGCAATGTGTTTTGGGTTCCTTGCCAAGAACACATGAGCTGCAGCTGCCGTCTATTTGAGTTTTCAGGCATCTTATGCAGACATATATTAAGAGTCATGTCAAATAACAACTGTTTTCACATTCCTGACCAATATGTACCTGCCCGTTGGCGTAGTACTTGTTCATCGTCAGCTAACCCCTTCCCAGGTACAACTTCAAGGGATCATTCTGAAAGGATGCAAATTTTGAAATCCATGGCTTCAACGCTGGTCATGGAATCCATTGAAACAGAGGAACGCCTTGGTGCTGCTTACGAGCAAATCTCCATGGTTTTATCACGTATCAAAACCCTTCCTAGGTCAACCCACGGGGTGAATGACATTGCATATAATTATCAATCAGATTCATTGATTCTGCCGGAGGTGGATGATGCTGATGGTATAATTCATGGCTTTACAATTGCAAATCCCCATGATTCTATCACTTTAGGAAAACTAAAGGAGAGAAGGGCAAGAGATGGAGTTGATATGAGTAGGAAGCGAAGACATATTTCAGGGCCGTTGTGTGGGCAATATGGACATGATGCATCTGATTGCTCAACGATGGCTGGTGATAATTTGAATGGAGATGCACTAGGGTACTCGTAG 2277 0.4168 MSKGTSLVLDSSENGTDLSQDDIGTIEETPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGVKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFNIDSNNRLEHIAWSHASSIQLYESFGDAVVFDTTHRLDAYDMFLGIWLGVDNHGMTCFFGCALLRDENIQSFSWALKAFLSFMEGKAPQTMLTDHNMWLKEAISVEMPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFEEGWGQMVDKYGLHANKHIVSLYSLRTFWALPFLRGYFFAGLTSTNQSESINAFIQRFLGAQSQLDRFVEHVADIVEFNYGAGSKQKMQRKLQKVCLKTGSPIESHAATMLTPYAFNKMQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCNVFWVPCQEHMSCSCRLFEFSGILCRHILRVMSNNNCFHIPDQYVPARWRSTCSSSANPFPGTTSRDHSERMQILKSMASTLVMESIETEERLGAAYEQISMVLSRIKTLPRSTHGVNDIAYNYQSDSLILPEVDDADGIIHGFTIANPHDSITLGKLKERRARDGVDMSRKRRHISGPLCGQYGHDASDCSTMAGDNLNGDALGYS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0674 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 636 IPR031052 GO:0006355
Lele21g0674 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Lele21g0674 758 MobiDBLite consensus disorder prediction 1 23 - -
Lele21g0674 758 MobiDBLite consensus disorder prediction 1 34 - -
Lele21g0674 758 Pfam MULE transposase domain 275 367 IPR018289 -
Lele21g0674 758 Pfam SWIM zinc finger 563 584 IPR007527 GO:0008270
Lele21g0674 758 SMART 26again6 562 589 IPR006564 GO:0008270
Lele21g0674 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0674 Lele-ChrLele21 4457696 4460495 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele21g0674 MULE 8.4e-21 CL0219