Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0670 ATGTCAGCAGTAGTTGAAGATACAATAATAAGATCCAAGAAACTATCATCAACGGGAAGAGCTCCTTGCTGTGACAAAGTGGGTCTCAAGAAAGGAAGATGGACGTCTGAGGAAGATAAGCTCTTAACCGACTATATTCAACAGCACGGCGAAGGCTCCTGGAGATCCTTGCCCAGAAATGCAGGGTTATTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTATTTGAGGGAAGATGTGAAGAGAGGCAACATTACTGCTCAGGAAGAGGCCATGATTGTGAAGCTTCATGGGGCGATCGGTAATAGGTGGTCTGTAATAGCGAGGCATCTACCGGGAAGAACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTGAGAAGAAAAATTTACTGTTTCATGAACTCAAACTCGGACGACATTCTCCCACCTATCGACATTGTGGCTCTGAACGCAGCTGTTTCATCCAAACGAGGAAGAGGTGGTCGAGGAAGACCAACTCAAGCACCCATGCAAGAAGAGGACAAGAACAATATCACTTCAAACCAATACTCGCACTCAGATATGAATGCTCATGATCTGTTCGACAAAATGCATCAGAGAAAAGCTAACCCAGATGAAGCTGAGGCAATTTCAATGATGGATTCTAGATCTTGGAGCCAGAATCACCAGGAAGAGACCTCTAGTGGCATTGGTTTTGATGCATATTGTGAGATGAGTAATGATGATACAAATGGCAAAGCAGCATTTTGCCCCAGCTTGGTTGGAGAAGGTGAGGCCTTGGGGCAATTTCAATGGCTAGATGATGAAGCAATGGAACTTAATTACATGTTTGAAAGTGGCATGCTTATGAACTCAACCGGTAGTGGAAATAACAGTATTATGGGAAGAGAATATGGGTATGGAGTGGGTGGCGGTGGTAATAAGGAGATGGATATTCCAACACGCGAGGATAGTAAAAGTGGTGTTTGGAGCTCTGTATCAAATTACACAGAGAGTTCATCATCAGGGAATTCTGTTTATGACTATCAGTGGGTTGATTGGGATATTTCAGCTAGTGCCCAGTCCCATAATCAATGGAACCTGCAGTACTCTGAAGAAAGCCTGATGATGGCTTGTTCGTGGGATGCCACTGCAAATGGTGAAGTAAATAACTTCCACTGA 1173 0.4356 MSAVVEDTIIRSKKLSSTGRAPCCDKVGLKKGRWTSEEDKLLTDYIQQHGEGSWRSLPRNAGLLRCGKSCRLRWINYLREDVKRGNITAQEEAMIVKLHGAIGNRWSVIARHLPGRTDNEIKNYWNSHLRRKIYCFMNSNSDDILPPIDIVALNAAVSSKRGRGGRGRPTQAPMQEEDKNNITSNQYSHSDMNAHDLFDKMHQRKANPDEAEAISMMDSRSWSQNHQEETSSGIGFDAYCEMSNDDTNGKAAFCPSLVGEGEALGQFQWLDDEAMELNYMFESGMLMNSTGSGNNSIMGREYGYGVGGGGNKEMDIPTREDSKSGVWSSVSNYTESSSSGNSVYDYQWVDWDISASAQSHNQWNLQYSEESLMMACSWDATANGEVNNFH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0670 390 Gene3D - 88 133 - -
Lele21g0670 390 Gene3D - 28 84 - -
Lele21g0670 390 SMART sant 83 131 IPR001005 -
Lele21g0670 390 SMART sant 30 80 IPR001005 -
Lele21g0670 390 SUPERFAMILY Homeodomain-like 28 125 IPR009057 -
Lele21g0670 390 CDD SANT 88 129 IPR001005 -
Lele21g0670 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Lele21g0670 390 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 19 229 - -
Lele21g0670 390 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Lele21g0670 390 CDD SANT 33 78 IPR001005 -
Lele21g0670 390 FunFam Myb transcription factor 28 84 - -
Lele21g0670 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Lele21g0670 390 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Lele21g0670 390 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Lele21g0670 390 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Lele21g0670 390 MobiDBLite consensus disorder prediction 174 188 - -
Lele21g0670 390 MobiDBLite consensus disorder prediction 159 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0670 Lele-ChrLele21 4438637 4442320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0670 19 277 MYB Transcription Factor Family AT5G49330 46.718 7.97e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele21g0670 Myb_DNA-binding 1.1e-13 CL0123