Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0660 ATGAGAGGAACCAAAGGAAAAAAGAACAGTAGCTCAAACCTCAAAGTTGCAGAACAGAGTTCAGTGCATTTGAGCTTTGATTCCCTTTTACGCTTGTCTACTCTTCAATCAGAGCTGGATGTTAGGAACACTATGGAGAAAGCAAAATGTAGATGGCTTCGCCCTAATGAGATTCATGCTATACTTAGTAATTACAAGTATTTCACCATCCATGTAAAGCCAGTGCACATGCCTCAAAGTGGTACCATAGTATTATTTGATCGCAAGATGCTTAGGAACTTTCGAAAAGATGGATACAACTGGAAAAAGAAAAACGATGGAAAAACTGTGAAGGAAGCTCATGAACACTTAAAATTTATAGTTTTGGACATTCATTCTGATCATTTCCCCCTATCAATCGGGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGATAACCCAAGATTAGAGTTTGGAACACATAGTTCTTGTTCACTATCGTGAAACACAAGAGTTGCAGGGCTCTCCGGCTACGCCTGTGAATTCATATTCTAGTTCGGGCCCTAATCCAACTTCACCGTTGATTTTATCAGAAGAATTGGATTCTGGGACCAACAATCCATTTGCTGGTGAAGTTAATGACAATTTGAAACTCAAGAGTCATGAACTGAGGCTTCTTGAGCTCAACACACTTGAATGGGATGATCTAGTGGTTACAAATTACCTCAACAATTCTACCACATCTATGGGAGCCAAGGTTCCATATTTTGATCAACAAAATCAGTCTTTGTTGAATGGTAATTTGAGCAATGTAACTAGCAGTCTGTCTGCTGAAATTCCTTCTTTTGATAACATAACACAACCTATTACTGGGAGCAATAATGCCCCTTATGGTTTCCCAGAATCTGTAAATATTCAGACAACAGATAGTCAAGCAAATCCAAATGCAGAAAAGGGATATCCCGTCGCTGTGGGTGGTGTTGATTCCTTGGAGACTTTGGTCAATGATAGTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATCAACCACATGATTTCTGATTCACAATGTTCTGTAGATGAAACAGCTCTTGTATCGCCCGGTATATCTATTCAAGAACCATATTCTTCTCTGGTAGAGAATCATCAGAAACCTTCTATTCCCGAACAGCTTTTTAATATCACTGACGTCTCTCCTTCATGGGCATCTTCCACTGAGAAGACCAAGATCCTGGTCGCTGGAATCTTTCATGATAACTATCTAGACCTTGCAAAGTCTAAACTATTTTGTGTCTGCGGTGATGTAAGTGTTCAAGCTGATATTGTTCAAGTTGGGGTCTACCGATGCTGGGTACCATCTCATTCCCCAGCATTTGTAAATCCCTATATGAGCTTTGATGGCCATAAACCCATAAGCCAGTACTTGGTTAAGTCAACTGAAGACAACAAAACTCGATTTCCTCAAGCAAAAGATGCACTGTTTGAAACATCCTTGAAAAACGGATTAAAGGAATGGCTGTTAGAAAGAATTCTCTTGGGCCGTAAGACTACTGAATATGATTCCCAAGGTCAAGGGGTAATACATTTGTGCGCAATTCTGGGATATACTTGGGCAGTTTCATTATTTTCAGGATCGGGCTTGTCACTTGATTTACGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAAAATGGTTGCAGTGCTGTTGTCTGCTGGGGCAAAGCCTAACTTAGTCACAGATCCTACTCCACAAAATCCTGGTGGACGCACTGCTGCTGATCTTGCTTTTATGCAGGGTTATGAAGGCTTAGCAGCTTATCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATTAGTGGCAAACTGGAAACAAGCACAAATGATCCTGTAGATTATGACAATCTCACTGAGGACCAACTTATATCTAAAGGATACATTGGCAGCTTACCGAACAACTGCTGA 1998 0.4064 MRGTKGKKNSSSNLKVAEQSSVHLSFDSLLRLSTLQSELDVRNTMEKAKCRWLRPNEIHAILSNYKYFTIHVKPVHMPQSGTIVLFDRKMLRNFRKDGYNWKKKNDGKTVKEAHEHLKFIVLDIHSDHFPLSIGLVMKKGSMYTMHMAKITQDXSLEHIVLVHYRETQELQGSPATPVNSYSSSGPNPTSPLILSEELDSGTNNPFAGEVNDNLKLKSHELRLLELNTLEWDDLVVTNYLNNSTTSMGAKVPYFDQQNQSLLNGNLSNVTSSLSAEIPSFDNITQPITGSNNAPYGFPESVNIQTTDSQANPNAEKGYPVAVGGVDSLETLVNDSLQSQDSFGRWINHMISDSQCSVDETALVSPGISIQEPYSSLVENHQKPSIPEQLFNITDVSPSWASSTEKTKILVAGIFHDNYLDLAKSKLFCVCGDVSVQADIVQVGVYRCWVPSHSPAFVNPYMSFDGHKPISQYLVKSTEDNKTRFPQAKDALFETSLKNGLKEWLLERILLGRKTTEYDSQGQGVIHLCAILGYTWAVSLFSGSGLSLDLRDKFGWTALHWAAYCGREKMVAVLLSAGAKPNLVTDPTPQNPGGRTAADLAFMQGYEGLAAYLSEKSLVEQFNDMSLAGNISGKLETSTNDPVDYDNLTEDQLISKGYIGSLPNNC 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0660 665 ProSiteProfiles Ankyrin repeat profile. 553 585 IPR002110 GO:0005515
Lele21g0660 665 ProSiteProfiles Ankyrin repeat region circular profile. 553 581 - -
Lele21g0660 665 SUPERFAMILY E set domains 391 472 IPR014756 -
Lele21g0660 665 MobiDBLite consensus disorder prediction 172 193 - -
Lele21g0660 665 Pfam CG-1 domain 48 166 IPR005559 GO:0003677
Lele21g0660 665 SMART ANK_2a 553 582 IPR002110 GO:0005515
Lele21g0660 665 SMART ANK_2a 592 623 IPR002110 GO:0005515
Lele21g0660 665 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 40 471 - -
Lele21g0660 665 SUPERFAMILY Ankyrin repeat 497 615 IPR036770 -
Lele21g0660 665 ProSiteProfiles CG-1 DNA-binding domain profile. 41 173 IPR005559 GO:0003677
Lele21g0660 665 Gene3D Immunoglobulins 386 475 IPR013783 -
Lele21g0660 665 SMART CG_1_2 45 168 IPR005559 GO:0003677
Lele21g0660 665 Pfam Ankyrin repeats (3 copies) 505 582 IPR002110 GO:0005515
Lele21g0660 665 Gene3D - 476 622 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0660 Lele-ChrLele21 4371608 4378669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0660 472 577 CAMTA Transcription Factor Family AT4G16150 67.925 2.57e-40 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0660 21 4371608 4378669 Lele21g0660 21 4371608 4378669 ECH
Lele21g0660 21 4371608 4378669 Lele23g1378 23 18707707 18715424 hybridization
Lele21g0660 21 4371608 4378669 Lele24g0648 24 4322297 4329477 hybridization